| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3971 |
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| Symbol | |
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| ID | 5110194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4351237 |
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| End bp | 4351887 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505234 |
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| Product | peptidase S14, ClpP |
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| Protein accession | YP_001189450 |
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| Protein GI | 146308985 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.269828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTGCCG AAGGTGACAC CGCCGAGATC TTCCTCTACG ACGCGATTGG CGACTGGTAC
GGCATCGGTG CCGAGCAAGT CGCCCAGGCG CTGCGCGACC TGCAGGGCCG CGACGTGGCC
CTGCGCATCA ACAGTCCAGG CGGCGATGTG TTCGATGGCC GCGCGATGGC CACCGCCATC
AGCCAGCACA AGGGCAAGGT CACCGCCTAC ATCGATGGCC TGGCTGCCTC CGCTGCCACC
TACGTGGCGC TGGCAGCGGA TGAGGTGGAG ATCGCCGGCG GAGCCTTTTT CATGATCCAC
AACGCGTGGA CGCTGAACAT GGGCAATGCC GATGACTTCC GCGAAACCGC CAGCCTGCTG
GACAAGGTGG ATGACTCCAT CGTTGCCGAC TACATCCGCA AGACCTCGCA AGCCGACGAG
CAAGTGCGCG CCTGGATGAA GGCCGAAACC TGGTTCAGCG CCGAAGAGGC TGTGGAGCAC
GGCTTTGTTG ATCGCCTGTC GCAGAGCAAG AAGGCCGCCA GCAACTGCTG GAACCTGGCC
GCTTATAACA ACGCCCCAGC CGCCCTGCTG GCCCACACCC AACAAACCCC GCAGTACGAC
CGCGCCCGCG CCGAGCGCCG GTTGAGCCTG CTGGAACGAA CCGCCGCGTA G
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| Protein sequence | MRAEGDTAEI FLYDAIGDWY GIGAEQVAQA LRDLQGRDVA LRINSPGGDV FDGRAMATAI
SQHKGKVTAY IDGLAASAAT YVALAADEVE IAGGAFFMIH NAWTLNMGNA DDFRETASLL
DKVDDSIVAD YIRKTSQADE QVRAWMKAET WFSAEEAVEH GFVDRLSQSK KAASNCWNLA
AYNNAPAALL AHTQQTPQYD RARAERRLSL LERTAA
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