| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3944 |
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| Symbol | trpC |
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| ID | 5110167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4329623 |
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| End bp | 4330462 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505207 |
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| Product | indole-3-glycerol-phosphate synthase |
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| Protein accession | YP_001189423 |
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| Protein GI | 146308958 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTGC CAACCGTACT GGAGAAGATC GTCGCCCGTA AGTTCGAGGA AGTGGCCGCG
CGCCGCGTCC AGGTCAGCCT CGCCGAACTG GAAGCGGCCG CCCGCGCCGC CGATGCCCCG
CGCGGCTTTG CCCGCGCGCT GCTGGAGCAG GCGGCGCGCA AGCAGCCGGC GGTGATTGCC
GAGATCAAGA AGGCCTCGCC GAGCAAGGGC GTGCTGCGCG CCGACTTCGT GCCCGCCGAT
ATTGCCCGCA GCTACGAGGC CGGCGGTGCC ACCTGCCTGT CGGTGCTGAC CGATATCGAT
TTCTTCCAGG GTGCCGATGA ATACCTGCAG CAGGCTCGCG CCGCCTGCGC GCTGCCGGTG
ATCCGCAAGG ATTTCATGGT CGATCCCTAC CAGATCGTCG AGGCCCGCGC CCTCGGCGCC
GATTGCGTGC TGCTGATCGT GTCCTGCCTG GATGACGTGC GCATGGCCGA ACTGGCCGCG
GTGGCCAAGG ATGTCGGCCT CGACGTGCTG GTGGAGGTGC ATGATGGCAA CGAACTGGAG
CGCGCGCTCA ATACCCTGGA TACGCCGCTG GTAGGGATCA ACAACCGTAA CCTGCACACC
TTCGAGGTCA GCCTGGAAAC CACTCTGGAT CTGCTGCCGC GCATTCCGCG TGAGCGCCTG
GTGGTGACCG AGAGCGGCAT TCTCAACCGC GCCGATGTCG AGCTGATGGA GATCAGCGAG
GTGTATGCCT TCCTGGTCGG CGAGGCTTTT ATGCGGGCTG AGAGCCCCGG GGCCGAGCTG
CAGCGTCTGT TCTTTCCCGA GCGTGGGCGG CCGACGGTGG TCGGCAAGGA CCCCGAGTAA
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| Protein sequence | MSVPTVLEKI VARKFEEVAA RRVQVSLAEL EAAARAADAP RGFARALLEQ AARKQPAVIA
EIKKASPSKG VLRADFVPAD IARSYEAGGA TCLSVLTDID FFQGADEYLQ QARAACALPV
IRKDFMVDPY QIVEARALGA DCVLLIVSCL DDVRMAELAA VAKDVGLDVL VEVHDGNELE
RALNTLDTPL VGINNRNLHT FEVSLETTLD LLPRIPRERL VVTESGILNR ADVELMEISE
VYAFLVGEAF MRAESPGAEL QRLFFPERGR PTVVGKDPE
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