| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3936 |
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| Symbol | |
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| ID | 5106470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4321951 |
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| End bp | 4323213 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505199 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001189415 |
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| Protein GI | 146308950 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC GTCATCTGCT GGCTGTGGGC GCCCTCGGCC TGCTTGCGGG CTGGGCGCTG
CGACCGCACG ATCGCGGCCA GCAGCACGAC GCCTACTTCG CCTCCCTCAA CCGCCTTCTG
CAGCAGGAAG GCAATGGTAT TCCAGCGCTG CTGCTGGATC TGGACCGCCT GGATGCCAAT
GCCGATCTGC TCGCCGAGCG ATTGAACGGC CGTCTTGGCT TGCGCCTGGT GAGCAAATCG
CTGGCCAGCG TGGGGCTGCT CGAATATCTG GCCAAGCGCC TGCAAACCCA GCGCTTCATG
GTCTTTCACC AGCCGCAACT GAACCGCCTG GCGCGCAGTT TCCCGCAGGC CGACCTACTG
CTGGGCAAAC CCATGCCGGT GCATGCCGCG CTGAACTTCT ATCGCCAGCT GCCAGGCCAT
ATTGGTTTCA CCCCTGCGCG CCAGCTGACC TGGCTTATCG ATAGCGCAGA GCGGCTGCGC
CAGTACGCCG AGCTGGCCCG GGCGCTGGGG CAACCCCTGC GCATTGCCCT GGAAATCGAT
ATCGGTATGG CGCGAGGCGG CTTTCGCGAT CCGCAAGCCC TGGGCCAGGC TCTGCAGCAC
CTGCAGGACC CGCCGCAGCT GCAATTGCAG GGGTTGATGG GGTATGACGC GCACGTCGCC
CATGCCGCGC CCTGGACCGA ACAACGCCGG GTTTTCGCCG ATACCAACGC TCGTTACCGT
GAATTCCTCG CCGCAGCTCG GGCGTTCCCT CTGCTCTGGC CGCGGCAGCC GCTGCTCAAT
GGCGGTGGCA GCCTGACCTA CCCACTGCAC AGCCGCTCGG ACACTCCGCT CAATGAGGTC
GCGGTGGGCT CCGCTCTGCT CAAGCCGGGC GACTTCGACA CGCCTGCGCT GAGCGAACAT
CAACCGGCCC TGTGGATCGC CAGTCCACTG CTCAAGGTGG TCGACGGCGC CCTACCCTAT
CTGGGCGCCG TGCAGCCGCT GATGACCGCC TGGAATCCCA ATCGCGAGCA TGCCTATTAC
CTCTATGGGG GGCGCTGGCC CGCACACCCC GTATCGCCGG CCGGACTCGA CTACGACGCC
CTGTACGGAC GCAGTGCCAA TCAGGAGCGC CTGATCGGCA GCGCGGCCAC CGGCCTGAGA
GCGGACGACT GGGTTTTTCT GCGCCCGGCA ATCAGCGAAG GTTTGCTTGG CGGTTTCGGC
GAAATGCGTC TGCTGCGCGC AGGCCAGCTG GTCGGTCGCT GGAGCACGCT GCCCACCGGC
TGA
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| Protein sequence | MKRRHLLAVG ALGLLAGWAL RPHDRGQQHD AYFASLNRLL QQEGNGIPAL LLDLDRLDAN
ADLLAERLNG RLGLRLVSKS LASVGLLEYL AKRLQTQRFM VFHQPQLNRL ARSFPQADLL
LGKPMPVHAA LNFYRQLPGH IGFTPARQLT WLIDSAERLR QYAELARALG QPLRIALEID
IGMARGGFRD PQALGQALQH LQDPPQLQLQ GLMGYDAHVA HAAPWTEQRR VFADTNARYR
EFLAAARAFP LLWPRQPLLN GGGSLTYPLH SRSDTPLNEV AVGSALLKPG DFDTPALSEH
QPALWIASPL LKVVDGALPY LGAVQPLMTA WNPNREHAYY LYGGRWPAHP VSPAGLDYDA
LYGRSANQER LIGSAATGLR ADDWVFLRPA ISEGLLGGFG EMRLLRAGQL VGRWSTLPTG
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