Gene Pmen_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3930 
Symbol 
ID5106464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4317819 
End bp4318169 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content59% 
IMG OID640505193 
Productiron-sulfur cluster insertion protein ErpA 
Protein accessionYP_001189409 
Protein GI146308944 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0777842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG AAACCTTCAC CCCTGCCCCC TTGCACTTCA CCCAGGGTGC TGCAAGCAAG 
GTGAAGACCC TGGTCGATGA AGAGGGTAAT CCGCGGCTGA AGCTTCGCGT ATTCGTCACG
GGCGGTGGCT GCTCGGGCTT TCAGTACGGC TTCACCTTCG ATGAGGATGT AGCCGAGGAC
GACACCATCG TCGAGCGCGA GGGCGTCAGT CTGGTGGTCG ATGCCATGAG CTTCCAGTAT
CTGGTGGGCT CCGAGGTCGA CTATCAGGAA GGGCTGGAAG GATCGCGCTT CGTGATCAAG
AACCCCAACG CCACCACCAC CTGTGGCTGT GGATCGTCAT TCTCGATCTG A
 
Protein sequence
MSVETFTPAP LHFTQGAASK VKTLVDEEGN PRLKLRVFVT GGGCSGFQYG FTFDEDVAED 
DTIVEREGVS LVVDAMSFQY LVGSEVDYQE GLEGSRFVIK NPNATTTCGC GSSFSI