| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3927 |
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| Symbol | |
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| ID | 5107301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4313865 |
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| End bp | 4315064 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640505190 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_001189406 |
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| Protein GI | 146308941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000017019 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGG TCGAAGAGCA GCTGGCGCTG ATCAAGCGCG GTGCGGAAGA GGTTCTGGTT
GAGGCTGAGC TGGTCGAAAA GCTCAAGCGT GGTCAGCCGC TGCGGATCAA GGCGGGTTTC
GATCCGACCG CGCCGGATCT GCATCTCGGT CACACCGTGC TTATTAATAA GCTGCGTCAG
TTTCAGGAGC TCGGCCATCA GGTGATTTTC CTGATCGGTG ACTTCACCGG CATGATTGGC
GATCCCAGCG GCAAGAGCGC CACGCGTCCG CCGCTGACCC GCGAGCAGGT TTTGGATAAT
GCCGAGACCT ATAAGCAGCA GGTATTCAAG ATCCTCGATC CGGCCAAGAC CGAGGTGGCC
TTCAACTCCA CCTGGATGGA TCAGCTCAAG CCTGCTGACT TCATTCGTCT GGCTTCGCAG
TACACCGTGG CGCGTATGCT CGAGCGCGAC GACTTCGACA AGCGCTACAC CAGCAATCAG
CCGATCGCCA TCCACGAATT CCTCTATCCG TTGGTGCAGG GTTACGACTC CGTGGCGCTC
AAGGCCGATG TCGAGCTGGG CGGCACCGAT CAGAAGTTCA ATCTGCTGAT GGGACGCGAG
CTGCAGCGCG CCTATGGGCA GGAGTCGCAG TGCATCGTCA CCATGCCGTT GCTGGAAGGT
CTCGATGGCG TAAAGAAGAT GTCCAAGTCG CTGGGTAACT ACGTGGGCAT CCAGGAAGCG
CCGGGCGTGA TGTACAGCAA GCTGGTGTCC ATGCCCGATG CGTTGATGTG GCGCTACTTC
GAGCTGCTCA GCTTCCGCTC CATGGAAGAG ATCGAGCAGT TCAAGCGTGA TGTTCAGCAG
GGTGCGAATC CCCGTGACAT CAAGATCAAG CTGGCTGAAG AGCTTGTTGC ACGTTTCCAT
GGTGAAGAGG CAGCCGCCAA TGCGCACCGT TCCGCGGGTA ATCGCATGAG GGATGGTGAG
CTGCCGGAGG ATCTGCCAGA GGTCGAGCTG GTGTCGGCTG AAGATATGCC GATCTCATCC
GTCCTTAATA AGGCGGGCCT GGTGAAGAAC GCTGCCGTTG CTCGGGATCT GCTCGGGTCG
GGCGGGGTGC GTGTAGATGG CGAGGTGGTT GATCGCGCCT TTCTGTTCAA GGTGGGCGCT
ACGCATGTTT GCCAGGCCGG CAAGAGGGCC TTTGCGCGCA TCACGCTCAA GGCCGAGTAA
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| Protein sequence | MKSVEEQLAL IKRGAEEVLV EAELVEKLKR GQPLRIKAGF DPTAPDLHLG HTVLINKLRQ
FQELGHQVIF LIGDFTGMIG DPSGKSATRP PLTREQVLDN AETYKQQVFK ILDPAKTEVA
FNSTWMDQLK PADFIRLASQ YTVARMLERD DFDKRYTSNQ PIAIHEFLYP LVQGYDSVAL
KADVELGGTD QKFNLLMGRE LQRAYGQESQ CIVTMPLLEG LDGVKKMSKS LGNYVGIQEA
PGVMYSKLVS MPDALMWRYF ELLSFRSMEE IEQFKRDVQQ GANPRDIKIK LAEELVARFH
GEEAAANAHR SAGNRMRDGE LPEDLPEVEL VSAEDMPISS VLNKAGLVKN AAVARDLLGS
GGVRVDGEVV DRAFLFKVGA THVCQAGKRA FARITLKAE
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