Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3925 |
Symbol | |
ID | 5106459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4306052 |
End bp | 4306798 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640505183 |
Product | pantothenate kinase |
Protein accession | YP_001189404 |
Protein GI | 146308939 |
COG category | [K] Transcription |
COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.919266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTTG AGCTCGACTG CGGTAACAGT TTCATCAAGT GGCGAGTGAT TTCGCCTGGC GGCCGTGAGC GTATCTGTGC AGGCATCGTC GACTCCGACG ACGGGCTTTT CGAGGCTCTT GCCGGTTCCG GTGTGAAGGT ACAGCGCTGC CGCCTGGTCA GCGTGCGCAG CGATGCGGAG ACCGAGCAGC TGGTCACTCG ATTGAAAGCC TCTCTAGGTG TCGAGGTGGT CTGCGCGCAG TCCTCCAGCC AGGTGGGTGG CGTTCGCAAC GGCTATCACG ACTATCAGCG TCTGGGGTTG GACAGGTGGT TGGCGCTGCT TGGTGGTTAT CATCTAGGAC AGCGGGCCTG CTTGGTGGTC GACTTGGGGA CCGCTGTGAC GGCTGATTTC GTTTCCGCCG ATGGCGAGCA TCTCGGAGGG TTCATTTGCC CGGGGCTGCC GCTCATGCGA GATCAGTTGA GCACCCATAC CCGGCGCATC CGCTATGACC GTGAGGTGGC GCTGGCAGCG CTGCAGGAGT TGGAACCTGG GCGCTCAACT GCAGAGGCTG TAGAGCGTGG CTGCTTGCTG ATGTTGAGAG GGTTCGTCGC CGAGCAGCTG GCTCAGGCGC GCTCGCGCTT TCCCGGCGGT TTCGAGGTCT TCCTGACGGG AGGGGACGCT GAGCTGGTGC GGGATGCAGT GCCAGAGGCT CAGGTCGTTC CTGATCTGGT TTTCGTTGGG CTGGCTATCG CCTGCCCCTT GAGTTGA
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Protein sequence | MILELDCGNS FIKWRVISPG GRERICAGIV DSDDGLFEAL AGSGVKVQRC RLVSVRSDAE TEQLVTRLKA SLGVEVVCAQ SSSQVGGVRN GYHDYQRLGL DRWLALLGGY HLGQRACLVV DLGTAVTADF VSADGEHLGG FICPGLPLMR DQLSTHTRRI RYDREVALAA LQELEPGRST AEAVERGCLL MLRGFVAEQL AQARSRFPGG FEVFLTGGDA ELVRDAVPEA QVVPDLVFVG LAIACPLS
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