Gene Pmen_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3922 
SymbolsecE 
ID5106456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4303122 
End bp4303490 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content55% 
IMG OID640505176 
Productpreprotein translocase subunit SecE 
Protein accessionYP_001189401 
Protein GI146308936 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.189824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTA AGGCTGAAGC CAAAGACTCT CGCTTTGATC TGGTCAAGTG GCTGGTTGTC 
GCTGCCCTGG TTGCTGTGGG TGTCGTAGGT AATCAGTACT TCTCTGCTGA GCCGGTTCTG
TATCGTGTTC TGGGTCTGGT GGCGTTGGCT GCTGTTGCTG CGTTCGTGGC ATTTCAGACT
GCTCGTGGTC AGGCCTTTGC GGTGCTGCTG AAAGAAGCGC GCGTCGAGAT TCGTAAAGTT
GTTTGGCCGA CCCGCCAGGA GACCATGCAG ACCACTCTGA TCGTGGTTGC AGTGGTTCTG
GTAATGGCGC TGCTGCTGTG GGGGCTCGAT TCCCTGCTCG GTTGGCTTGT TTCCCTGATT
GTTGGTTAA
 
Protein sequence
MNVKAEAKDS RFDLVKWLVV AALVAVGVVG NQYFSAEPVL YRVLGLVALA AVAAFVAFQT 
ARGQAFAVLL KEARVEIRKV VWPTRQETMQ TTLIVVAVVL VMALLLWGLD SLLGWLVSLI
VG