Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3922 |
Symbol | secE |
ID | 5106456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4303122 |
End bp | 4303490 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640505176 |
Product | preprotein translocase subunit SecE |
Protein accession | YP_001189401 |
Protein GI | 146308936 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0690] Preprotein translocase subunit SecE |
TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.189824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTTA AGGCTGAAGC CAAAGACTCT CGCTTTGATC TGGTCAAGTG GCTGGTTGTC GCTGCCCTGG TTGCTGTGGG TGTCGTAGGT AATCAGTACT TCTCTGCTGA GCCGGTTCTG TATCGTGTTC TGGGTCTGGT GGCGTTGGCT GCTGTTGCTG CGTTCGTGGC ATTTCAGACT GCTCGTGGTC AGGCCTTTGC GGTGCTGCTG AAAGAAGCGC GCGTCGAGAT TCGTAAAGTT GTTTGGCCGA CCCGCCAGGA GACCATGCAG ACCACTCTGA TCGTGGTTGC AGTGGTTCTG GTAATGGCGC TGCTGCTGTG GGGGCTCGAT TCCCTGCTCG GTTGGCTTGT TTCCCTGATT GTTGGTTAA
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Protein sequence | MNVKAEAKDS RFDLVKWLVV AALVAVGVVG NQYFSAEPVL YRVLGLVALA AVAAFVAFQT ARGQAFAVLL KEARVEIRKV VWPTRQETMQ TTLIVVAVVL VMALLLWGLD SLLGWLVSLI VG
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