| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3919 |
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| Symbol | rplA |
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| ID | 5106453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4301334 |
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| End bp | 4302029 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640505173 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001189398 |
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| Protein GI | 146308933 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGT TGACCAAGCG CCAAAAGGCC ATCGCGGCCA AGGTTGAAGC CGGCAAGGCC
TACACCTTCG AAGAAGCTGC CAGCCTGCTG GCTGAGCTGT CTGCCGTCAA GTTCACCGAG
TCCTTCGACG TCGCCGTGAA CCTGGGCGTA GACCCGCGTA AATCCGACCA GGTCGTACGT
GGCGCCACCG TTCTGCCGAA CGGCACTGGC AAGACCGTAC GCGTTGCCGT GTTCACCCAA
GGTCCGGGCG CTGAAGCTGC CCTGGCTGCC GGTGCCGACA AGGTTGGTAT GGACGATCTG
GCTGCCGAAA TGAAGGCCGG TGATCTGAAC TACGACGTGG TCATCGCTTC CCCGGACGCC
ATGCGCGTCG TTGGCCAGCT GGGCCAGGTA CTGGGTCCGC GCGGCCTGAT GCCGAACCCG
AAAGTCGGCA CCGTGACTCC AGACGTCGCT ACCGCAGTGA AGAACGCCAA GGCTGGTCAG
GTGCGTTTCC GTACCGACAA GAACGGCATC ATCCACACCT CTGTTGGCAA GGTCGGCTTC
GAAGCCGCTG CGCTGAAGCA GAACGTGGAA GCCCTGCTGG CTGACCTGAA GCGTCTGAAG
CCGTCGACCT CGAAAGGCAT CTACGTCAAG CGCGTGACCC TGAGCACCAC CATGGGTCCG
GGTCTGATCA TCGATCAGGC TTCGCTCGAC GCGTAA
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| Protein sequence | MAKLTKRQKA IAAKVEAGKA YTFEEAASLL AELSAVKFTE SFDVAVNLGV DPRKSDQVVR
GATVLPNGTG KTVRVAVFTQ GPGAEAALAA GADKVGMDDL AAEMKAGDLN YDVVIASPDA
MRVVGQLGQV LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VRFRTDKNGI IHTSVGKVGF
EAAALKQNVE ALLADLKRLK PSTSKGIYVK RVTLSTTMGP GLIIDQASLD A
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