| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3914 |
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| Symbol | rpsL |
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| ID | 5106448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4291093 |
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| End bp | 4291464 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640505168 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001189393 |
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| Protein GI | 146308928 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.455657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACTA TCAACCAGCT GGTACGTCAG CCGCGTAAGC GTATCGTCGA GAAATCCGAC
GTGCCTGCGC TGCAGAACTG CCCGCAGCGC CGTGGCGTGT GCACCCGCGT GTACACCACC
ACGCCGAAGA AACCTAACTC GGCACTGCGT AAAGTGTGCC GTGTGCGTCT GACCAACGGC
TACGAAGTGT CTTCGTACAT CGGCGGTGAA GGCCACAACC TGCAAGAGCA CAGCGTCGTG
CTGATCCGTG GCGGTCGTGT AAAGGACCTT CCGGGTGTGC GCTACCACAC CGTGCGTGGT
TCGCTGGATA CCTCCGGCGT TAAAGACCGT AAGCAGGGTC GTTCCAAGTA CGGTACCAAG
CGTCCGAAAT AA
|
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| Protein sequence | MATINQLVRQ PRKRIVEKSD VPALQNCPQR RGVCTRVYTT TPKKPNSALR KVCRVRLTNG
YEVSSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDTSGVKDR KQGRSKYGTK
RPK
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