| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3900 |
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| Symbol | rpsQ |
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| ID | 5106434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4281962 |
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| End bp | 4282228 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640505154 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_001189379 |
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| Protein GI | 146308914 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00230536 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGAAG TTGAAAAAAC AGTCCGTACG CTGACCGGCC GTGTTGTCAG CGACAAGATG
GACAAGACCA TCACCGTTCT GATCGAGCGT CGCGTCAAGC ACCCGATCTA CGGTAAATAC
GTCAAGCGTT CGACCAAGCT GCACGCTCAC GACGAAAGCA ACCAGTGCAA GATCGGCGAC
AAGGTTTCCA TTCGCGAAAC CCGCCCGCAG TCCAAGACCA AGTCCTGGGC TCTGGTTGAA
GTCGTTGAAC GCGCCGTCGA AGTCTAA
|
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| Protein sequence | MAEVEKTVRT LTGRVVSDKM DKTITVLIER RVKHPIYGKY VKRSTKLHAH DESNQCKIGD
KVSIRETRPQ SKTKSWALVE VVERAVEV
|
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