| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3898 |
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| Symbol | rplX |
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| ID | 5106432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4281244 |
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| End bp | 4281558 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640505152 |
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| Product | 50S ribosomal protein L24 |
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| Protein accession | YP_001189377 |
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| Protein GI | 146308912 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0198] Ribosomal protein L24 |
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| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00126984 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAGA TTCGTCGTGA CGACGAGATC ATCGTGATCG CCGGCAAAGA CAAAGGTAAG
CGCGGTAAGG TGCTCAAGGT TCTCGCTGAC GACCGTCTGG TCGTCGGTGG CATCAACCTG
GTGAAGCGTC ATACCAAGCC GAACCCGATG TCGGGCGTTC AAGGCGGTAT CGTCGAGAAA
GAAGCGCCGC TGCACGCTTC CAACGTTGCC ATCTTCAACT CTGAAACCAA CAAGGCTGAT
CGCGTTGGCT TCAAGATCGA AGACGGCAAG AAAATTCGTG TCTTCAAGTC CACCCAGAAG
CCGGTTGGCG CTTGA
|
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| Protein sequence | MQKIRRDDEI IVIAGKDKGK RGKVLKVLAD DRLVVGGINL VKRHTKPNPM SGVQGGIVEK
EAPLHASNVA IFNSETNKAD RVGFKIEDGK KIRVFKSTQK PVGA
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