| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3897 |
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| Symbol | rplE |
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| ID | 5106431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4280685 |
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| End bp | 4281224 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640505151 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001189376 |
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| Protein GI | 146308911 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000030586 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGAC TGAAAGAGAT TTACCGGAAG GAAATCGCGC CCAAGCTGAA GGAAGAACTG
AAGCTGGCCA ACGTGATGGA AGTTCCGCGC ATCACCAAGA TCACCCTGAA CATGGGCCTG
GGCGAAGCGA TCGGTGACAA GAAAGTCATC GAGAACGCCG TTGCCGACCT CGAGAAGATC
ACCGGTCAGA AAGTCGTTGT GACTCATGCC CGCAAGTCGA TCGCAGGTTT CAAGGTTCGT
GAAGGTTGGC CGATTGGCGT CAAGGTCACT CTGCGTCGCG AGCGTATGTA CGAGTTCCTG
GATCGTCTGC TGTCCATCTC CCTGCCGCGC GTGCGTGACT TCCGCGGCCT GAATGCCAAG
TCCTTCGATG GCCGTGGCAA CTACAGCATG GGCGTGAAAG AGCAGATCAT CTTCCCGGAA
ATCGATTACG ACAAGATCGA TGCGCTGCGT GGTCTGGACA TCACCCTGAC TACCACTGCC
CGTAACGATG ATGAAGGCCG CGCTCTGCTG CGTGCTTTCA ACTTCCCGTT CCGCAACTGA
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| Protein sequence | MARLKEIYRK EIAPKLKEEL KLANVMEVPR ITKITLNMGL GEAIGDKKVI ENAVADLEKI
TGQKVVVTHA RKSIAGFKVR EGWPIGVKVT LRRERMYEFL DRLLSISLPR VRDFRGLNAK
SFDGRGNYSM GVKEQIIFPE IDYDKIDALR GLDITLTTTA RNDDEGRALL RAFNFPFRN
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