Gene Pmen_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3896 
SymbolrpsN 
ID5106430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4280364 
End bp4280669 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content62% 
IMG OID640505150 
Product30S ribosomal protein S14 
Protein accessionYP_001189375 
Protein GI146308910 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0199] Ribosomal protein S14 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000012312 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA CAAGCATGAA GAACCGCGAG CTGAAGCGTC AGCAAACGGT TGCCAAGTAC 
GCCAAGAAGC GTGCCGAGCT GAAAGCGATC ATCGCCAACC CGAACTCCAC TCCGGAAGCT
CGTTGGGAAG CTCAGGTCGC TCTGCAGAAG CAGCCGCGTG ACGCCAGCGC CTCGCGCCTG
CGTAACCGCT GCCGCATCAC CGGCCGTCCG CACGGCGTTT ACCGCAAGTT CGGTCTGTCG
CGTAACAAGC TGCGCGAAGC CGCCATGCGT GGTGACGTAC CGGGCCTGGT GAAAGCCAGC
TGGTAA
 
Protein sequence
MAKTSMKNRE LKRQQTVAKY AKKRAELKAI IANPNSTPEA RWEAQVALQK QPRDASASRL 
RNRCRITGRP HGVYRKFGLS RNKLREAAMR GDVPGLVKAS W