| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3892 |
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| Symbol | rpsE |
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| ID | 5106426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4278367 |
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| End bp | 4278867 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640505146 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001189371 |
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| Protein GI | 146308906 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000919521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA ACGACCAAAA GCGCGACGAA GGCTATATCG AGAAGCTGGT CCAGGTTAAC
CGCGTTGCCA AGACCGTAAA GGGTGGCCGT ATCTTCACCT TCACCGCGCT GACCGTGGTG
GGTGATGGCA AGGGTCGCGT CGGTTTCGGC CGTGGCAAGT CCCGTGAAGT ACCGGCTGCC
ATCCAGAAGG CGATGGAAGC TGCGCGTCGC AACATGATCC AGGTGGATCT GAACGGCACC
ACTCTGCAGT ACCCGATCAA GTCCGCTCAT GGCGCCTCCA AGGTGTACAT GCAGCCGGCT
TCCGAAGGTA CCGGTATCAT CGCCGGCGGC GCCATGCGTG CCGTTCTGGA AGTGGCTGGT
GTACAGAACG TTCTGGCCAA GTGCTACGGC TCGACCAACC CGGTGAACGT GGTTCATGCC
ACCTTCAAGG GTCTGAAGAC CATGCAGTCT CCGGAATCCG TTGCAGCCAA GCGTGGCAAG
AGCGTCGAGG AGATTCTCTA A
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| Protein sequence | MANNDQKRDE GYIEKLVQVN RVAKTVKGGR IFTFTALTVV GDGKGRVGFG RGKSREVPAA
IQKAMEAARR NMIQVDLNGT TLQYPIKSAH GASKVYMQPA SEGTGIIAGG AMRAVLEVAG
VQNVLAKCYG STNPVNVVHA TFKGLKTMQS PESVAAKRGK SVEEIL
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