| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3890 |
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| Symbol | rplO |
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| ID | 5106424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4277751 |
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| End bp | 4278182 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505144 |
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| Product | 50S ribosomal protein L15 |
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| Protein accession | YP_001189369 |
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| Protein GI | 146308904 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0200] Ribosomal protein L15 |
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| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000709059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTGA ACGATCTGCG TTCCGCGCCG GGTGCCCGTC GCGAGAAGCA CCGTCCGGGC
CGTGGTATCG GCAGCGGTCT GGGCAAGACC GGTGGCCGTG GCCACAAAGG TCAGACCTCC
CGCTCCGGTG GTTCCATCGC TCCGGGCTTC GAGGGTGGTC AGCAGCCGCT GCACCGCCGT
CTGCCGAAGT TCGGCTTCGT CTCCCTGAAG GCTATGGACC GCGCTGAAGT GCGTACCTCC
GAGCTGAACA AGCTGGAAGG CGTTGTCACT CTGCAGGCTC TGAAGGATGC CAATCTGGTT
GGCCAACACG TACAGCGCGT GAAAGTGATG CTGTCCGGTG AGGTTACCCG TGCGGTCACC
CTGAAAGGCA TCGCTGCCAC CAAAGGTGCG CGTGCGGCTA TTGAAGCAGC TGGCGGTAAG
TTCGAGGACT AA
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| Protein sequence | MQLNDLRSAP GARREKHRPG RGIGSGLGKT GGRGHKGQTS RSGGSIAPGF EGGQQPLHRR
LPKFGFVSLK AMDRAEVRTS ELNKLEGVVT LQALKDANLV GQHVQRVKVM LSGEVTRAVT
LKGIAATKGA RAAIEAAGGK FED
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