Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3888 |
Symbol | rpmJ |
ID | 5106422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4276277 |
End bp | 4276393 |
Gene Length | 117 bp |
Protein Length | 38 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640505142 |
Product | 50S ribosomal protein L36 |
Protein accession | YP_001189367 |
Protein GI | 146308902 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0257] Ribosomal protein L36 |
TIGRFAM ID | [TIGR01022] ribosomal protein L36, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00159643 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTTC GTGCATCGGT GAAAAAGCTG TGCCGTAACT GCAAAATTAT CCGTCGCGAA GGTGTCGTGC GGGTGATCTG CAGCGCAGAG CCGCGTCACA AGCAGCGCCA AGGCTGA
|
Protein sequence | MKVRASVKKL CRNCKIIRRE GVVRVICSAE PRHKQRQG
|
| |