| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3887 |
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| Symbol | rpsM |
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| ID | 5106421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4275787 |
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| End bp | 4276143 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640505141 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001189366 |
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| Protein GI | 146308901 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00983662 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTA TTGCAGGCGT TAACATTCCG GATAACAAGC ACACTGTTAT CTCGCTGACC
TACATCTATG GTGTTGGTCG CACCACTGCA CAGAAAATCT GTGCCGCTAC CGGCGTAAAC
CCGGCTGCGA AAATCAAGGA TCTGACTGAC GAGCAGATCG AACAGCTGCG TGGCGAAGTA
GCCAAGGTGA ATACCGAAGG CGACCTGCGT CGTGAAGTGA ATATGAAGAT CAAGCGCTTG
ATGGATCTGG GTTGCTACCG CGGCCTGCGT CATCGTAAAG GTCTGCCGGT TCGCGGTCAG
CGTACCAAGA CCAACGCTCG CACCCGTAAG GGCCCGCGTA AGCCGATCCG CAAGTAA
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| Protein sequence | MARIAGVNIP DNKHTVISLT YIYGVGRTTA QKICAATGVN PAAKIKDLTD EQIEQLRGEV
AKVNTEGDLR REVNMKIKRL MDLGCYRGLR HRKGLPVRGQ RTKTNARTRK GPRKPIRK
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