| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3874 |
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| Symbol | |
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| ID | 5106408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4260573 |
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| End bp | 4261493 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505128 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001189353 |
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| Protein GI | 146308888 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.481806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.682249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA TTCTCGTAAC CGGCGGCGCC GGCTTTATCG GCTCGCACCT GGTCGACGCC
CTGTTGGCCG CCGGTCATGG CGTGTGCGTG CTGGACAATC TGTCCATGGG CAAGCGCAGC
AACCTGCCGC TGGACAACCC CCGTCTGCGT TTCATCGAAG GGGATGTCGC CGATGCGGCA
CAGGTCGAGC AGGCCATGGC CGGCTGCGAT GCCGTGGCGC ATCTGGCGGC GGTGGCCTCG
GTACAGGCCT CGGTGGACGA TCCAGTGGCC ACGCATCAGA GCAACTTCAT CGGTACCCTC
AACGTCTGCG AGGCCATGCG TCGGCACGGC GTGCGCCGCG TGCTGTACGC CTCCAGCGCG
GCCGTCTACG GCAACAATGG CGAAGGTCTG GCCATCGATG AAGACACCGC CAAGGCGCCG
CTCACGCCCT ATGCCGTGGA CAAGCTGGCC AGCGAGCAGT ATCTGGATTT CTACCGCCGT
CAGCATGGGC TGGAGCCGGC GGTGTTTCGT TTCTTCAATA TCTTCGGGTC GCGCCAGGAT
CCCTCTTCGC CCTATTCGGG GGTGATCAGC ATCTTCACCC AGCGCGCCCA GCAGGGGCAG
CCGATCAGCG TGTTCGGCGA TGGCGAGCAG ACCCGCGATT TCTTCTATGT CGGCGATCTG
ATCGAGTTGC TGCTGCAGGG CCTGTTCGGC GAGGTTGTCG AGCAGCCGGT GAATGTCGGC
TGGAACCAGG CGGTCAGCCT CAAGCAGCTG CTGGCGGAGA TCGGTGCGCT ATGCGGCGGC
CTGCCTCCGG TCACCCACCT GCCGGCGCGT GCCGGCGATA TTCGCCACTC GCGTGCCAAC
AATGCACGCC TGCAGGCGCA CTATCGGCTG CCGCAGCAGA CGCCGCTGCG TGAAGGCTTG
CGCCAGCTGC TCGGGCTGTA A
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| Protein sequence | MAEILVTGGA GFIGSHLVDA LLAAGHGVCV LDNLSMGKRS NLPLDNPRLR FIEGDVADAA
QVEQAMAGCD AVAHLAAVAS VQASVDDPVA THQSNFIGTL NVCEAMRRHG VRRVLYASSA
AVYGNNGEGL AIDEDTAKAP LTPYAVDKLA SEQYLDFYRR QHGLEPAVFR FFNIFGSRQD
PSSPYSGVIS IFTQRAQQGQ PISVFGDGEQ TRDFFYVGDL IELLLQGLFG EVVEQPVNVG
WNQAVSLKQL LAEIGALCGG LPPVTHLPAR AGDIRHSRAN NARLQAHYRL PQQTPLREGL
RQLLGL
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