| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3873 |
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| Symbol | |
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| ID | 5106407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4259658 |
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| End bp | 4260341 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505127 |
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| Product | OmpW family protein |
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| Protein accession | YP_001189352 |
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| Protein GI | 146308887 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.627912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACAAAT CGCTGTTCAC TGCCTCTCTG CTGGCCCTCG CCATCGCCGC CCCTGTCGCC
CAGGCTCACC AGGCCGGTGA CATCATCCTG CGTGCCGGTG CAATCACCGT CGACCCGCGC
GAAGACAGCG GCAATATCGA CCACGCCGTG CTCGGTAAGG TCCCCGGCAG TGGTGCCACC
CTGGACAGCG ATACCCAGTT GGGTCTGAAC TTCGCCTACA TGGTCACCGA CCATTTCGGC
ATCGAACTGC TGGCAGCCAC CCCGTTCAGC CATGACGTAG GCGTCAAGGG CATGCCCGGC
GCCTTCGCCG GCCTCAATGG CAAGCTGGGC AGCCTCAAGC ACCTGCCGCC GACCCTCAGC
GCCGTCTACT ACCCGCTGGA CAAGAGCTCG GCCTTCCAGC CCTATGTCGG TATCGGCATC
AACTACACCT GGTTCTTCGA TACCGAGCTG AGCAGCGAAG CCGAAGGCAA GGGCTTCCGC
GGCCTGGACA TGAAGGACTC CTGGGGCCTG GCCGGCCAGG TCGGCATGGA CTACATGCTC
ACCGACAAGC TGATGCTCAA TGCCCAGGTG CGCTACATCG ACATCGACAC CACCGGCACC
ACCTACCTGG CCGGCGACAA GGTCAAGGTC GATGTGGACG TCGATCCCTT CGTCTACATG
GTTGGCCTGG GCTACAAGTT CTGA
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| Protein sequence | MYKSLFTASL LALAIAAPVA QAHQAGDIIL RAGAITVDPR EDSGNIDHAV LGKVPGSGAT
LDSDTQLGLN FAYMVTDHFG IELLAATPFS HDVGVKGMPG AFAGLNGKLG SLKHLPPTLS
AVYYPLDKSS AFQPYVGIGI NYTWFFDTEL SSEAEGKGFR GLDMKDSWGL AGQVGMDYML
TDKLMLNAQV RYIDIDTTGT TYLAGDKVKV DVDVDPFVYM VGLGYKF
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