Gene Pmen_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3863 
Symbol 
ID5106397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4251134 
End bp4251712 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content64% 
IMG OID640505117 
Producthypothetical protein 
Protein accessionYP_001189342 
Protein GI146308877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.959734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCATC TGCTTCTCGC TCTGCCCTTT GCCCTGCTGC CCCTGGCTGC CGCACAGGCC 
CATGAACACG GGCACGACCA TGATCACCAC CACGATAGCC TCGGTGCCCA CGAGCACGGC
GTTGCCAGCC TCAACGTGGC GCTCGACGGC AACCTGCTGG AACTGCAGCT CGACAGCCCG
GCGATGAACC TGGTGGGTTT CGAACATGCC GCCAAGAGCG ATGCCGACAA GGCCAAGGTC
GCCGCCGCCA AGCGCGAACT GGAACAGCCC GTCAGCCTGT TCGCCCTGTC CAGCGGCGAC
TGCAAGGCCA CCGAGGTCGA GCTGCAGAGC CCGCTGTTCG CCGGCAAGGG GCACGACCAC
AAGCACGACC ATCACGACCA CAAGCACGAA GGCGAACACA GCGACATCCA TGCGCACTAC
CGCTTCGAAT GCGCCAAGGC CAACGAATTG AAACAACTGG ATCTGGCCGA ACTGTTCAAA
CGCTTCCCCG CCACCGAGAA GATTCAGGTA CAACTGATCG GCCCGAACGG CCAGCAGGGC
GCTGAACTGA CGGCCGCCCA GCCGCGCCTG AGCTTCTGA
 
Protein sequence
MRHLLLALPF ALLPLAAAQA HEHGHDHDHH HDSLGAHEHG VASLNVALDG NLLELQLDSP 
AMNLVGFEHA AKSDADKAKV AAAKRELEQP VSLFALSSGD CKATEVELQS PLFAGKGHDH
KHDHHDHKHE GEHSDIHAHY RFECAKANEL KQLDLAELFK RFPATEKIQV QLIGPNGQQG
AELTAAQPRL SF