Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3861 |
Symbol | |
ID | 5106395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4249688 |
End bp | 4250560 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505115 |
Product | thioredoxin |
Protein accession | YP_001189340 |
Protein GI | 146308875 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.339067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACT CCCCTTACAT CTTCGACATC TCCGGCGCCG CCAACTTCGA GCAACTGGTG ATCGAGAACT CCTTTCACAA GCCGGTGCTG GTGGACTTCT GGGCCGAGTG GTGCGCGCCG TGCAAGGCGC TGATGCCGAT GCTGGCGAAG ATCACCGAGG ACTATGCCGG CGAGCTGCTG CTGGCCAAGG TCAATTGCGA TATCGAGCAG GACATCGTCA TGCGCTTCGG CATCCGCAGC CTGCCCACCG TGGTGCTGTT CAAGAATGGT CAGCCGGTGG ACGGCTTCGC CGGCGCCCAG CCGGAAGCGG CGATCCGCGA GATGCTCAAA CCGCACGTCG CCGAACCGGC GCCGGTTGCC GCCGACCCGA TGGAGACCGC CCAGGCGCTG TTCGCCGAAG GCCGTTTCGC CGAAACCGAG GCCCTGCTCA AGCAGGTGCT GACCGAGAAC AACGAGAACG CCGCGGCATT GATTCTCTAT GCCCGCTGCC TGGCCGAGCG CGGCGAGCTG GGCGAGGCCC AAGTGGTGCT CGATGCGGTC AAGGGCGACG AGCACAAGCA GGCGCTGGCC GGCGCCAAGG CGCAGCTGAC CTTCCTGCGC CAGGCTGCCG ACCTGCCGGA AGTGGCCACG CTGAAAAGCC GCCTGGCACA GAATGCCGAG GATGACGAAG CGGTCTACCA GCTCGCCGTG CAGCAATTGG CGCGTCAACA GTACGAAGCC GCGCTGGATG GCCTGCTCAA ATTGTTCGTG CGCAACCGCA GCTACGGCGA CGGCCTGCCG CACAAGACCC TGCTGCAGGT ATTCGATCTG CTCGGCGGCG ACCACCCGCT GGTCACCAGC TACCGCCGCA AGCTGTACCA GGCGATCTAC TGA
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Protein sequence | MSDSPYIFDI SGAANFEQLV IENSFHKPVL VDFWAEWCAP CKALMPMLAK ITEDYAGELL LAKVNCDIEQ DIVMRFGIRS LPTVVLFKNG QPVDGFAGAQ PEAAIREMLK PHVAEPAPVA ADPMETAQAL FAEGRFAETE ALLKQVLTEN NENAAALILY ARCLAERGEL GEAQVVLDAV KGDEHKQALA GAKAQLTFLR QAADLPEVAT LKSRLAQNAE DDEAVYQLAV QQLARQQYEA ALDGLLKLFV RNRSYGDGLP HKTLLQVFDL LGGDHPLVTS YRRKLYQAIY
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