| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3856 |
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| Symbol | |
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| ID | 5106086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4245716 |
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| End bp | 4246378 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505110 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_001189335 |
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| Protein GI | 146308870 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACCG GCATAATCGA AGCCATCGGC AGCATCCGCG CCATGACGCC CAAGGGCGGC
GACGTACGCG TCTACGTGGC CACCGGCAAA CTCGATCTGG GCGATGTCAA GCTCGGCGAC
AGCATCGCCG TCAACGGCGT GTGCCTGACC GCGGTGGAAC TGCCTGGCGA CGGCTTTTGG
GCCGACGTCA GCCGCGAGAC GCTGGCGCGC ACCGCCTTCG TAGACCTCAA GCCCGGCAGC
GCGGTGAACC TGGAAAAGGC CCTGACGCCC ACCAGCCGCC TCGGCGGGCA CCTGGTCAGC
GGTCACGTCG ATGGCGTCGG CGAGATCGTC TCGCGTGCCG ATAACGCCCG CGCCGTGCAG
TTCAGGGTGC GTGCGCCGCG TGAGCTGGCC AAGTACATCG CACACAAGGG TTCGATCACC
GTCGACGGCA CCAGCCTGAC CGTCAACGCG GTCGATGGCG CCGAGTTCGA ACTGACCATC
GTGCCGCACA CCCTGGCCGA GACCATCATG GTCGACTACC AGGCCGGGCG TAAGGTCAAC
CTCGAAGTGG ACCTGCTGGC GCGTTACCTG GAGCGCCTGC TGCTCGGCGA CAAGGCCGCC
GAGCCCAAGG CCTCGGGCCT GACCGAAAGC TTTCTCGCCG AACACGGCTA CCTGAAGAAT
TGA
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| Protein sequence | MFTGIIEAIG SIRAMTPKGG DVRVYVATGK LDLGDVKLGD SIAVNGVCLT AVELPGDGFW
ADVSRETLAR TAFVDLKPGS AVNLEKALTP TSRLGGHLVS GHVDGVGEIV SRADNARAVQ
FRVRAPRELA KYIAHKGSIT VDGTSLTVNA VDGAEFELTI VPHTLAETIM VDYQAGRKVN
LEVDLLARYL ERLLLGDKAA EPKASGLTES FLAEHGYLKN
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