Gene Pmen_3851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3851 
Symbol 
ID5106081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4241910 
End bp4242443 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID640505105 
Productphosphatidylglycerophosphatase 
Protein accessionYP_001189330 
Protein GI146308865 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.990071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTGA CCGATCACCC CAACCAGGTT CCCGCCGAAT ACGTACCGCC GTCGGTATGG 
CGCAATCCCT GGCACTTCAT CGCCTTCGGC TTCGGCTCCG GCACCCTGCC CAAGGCGCCC
GGCACCTGGG GCTCGCTGGT GGCACTGCCG TTCGTGCCGC TGTGGCAGAT GCTGCCCGAC
TGGGGTTACT GGCTCATGCT CGGGGTGACC ATGCTGTTCG GCTTCTGGCT GTGCGGCAAG
GTGGCCGACG ACCTGCGTGT GCACGATCAC GAAGGCATCG TCTGGGACGA GATGGTCGGC
ATGTGGATCA CCCTGTGGCT GGTGCCCGAG GGCTGGGTCT GGTTGCTGCT AGGCTTTCTT
ATGTTTCGTC TGTTCGACAT CGTCAAACCC TGGCCGATTC GCTGGATCGA TCGGCACGTG
CATGGCGGTG TCGGCATCAT GCTCGACGAT GTAATCGCTG GCGTGTTCGC CTGGTTGGCC
ATGCAGGGGC TGGTCTGGGG GTGGGACCGT TATGCGGCGG TGTTGGGCTT CTAG
 
Protein sequence
MRVTDHPNQV PAEYVPPSVW RNPWHFIAFG FGSGTLPKAP GTWGSLVALP FVPLWQMLPD 
WGYWLMLGVT MLFGFWLCGK VADDLRVHDH EGIVWDEMVG MWITLWLVPE GWVWLLLGFL
MFRLFDIVKP WPIRWIDRHV HGGVGIMLDD VIAGVFAWLA MQGLVWGWDR YAAVLGF