| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3848 |
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| Symbol | ribA |
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| ID | 5106078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4239767 |
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| End bp | 4240426 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505102 |
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| Product | GTP cyclohydrolase II |
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| Protein accession | YP_001189327 |
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| Protein GI | 146308862 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0807] GTP cyclohydrolase II |
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| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.372386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCC TGTTTCGTAC TCATTGCCAG GAGCATCCGG TGTCCGTCGT GTTCGTCGCC
GCCTCCCAAC TGCCTACGCC CTTCGGCGTG TTCACCATGC ACGGTTTCCT CGACGAGGCC
ACCGGCAAGG AACACGTTGC CCTGACCTTC GGCGATGTGG CCGACGGCGC GCCCGTGCTG
GGCCGTCTGC ACTCCGAATG CCTGACCGGC GACGCCCTGT TCAGCCTGCG TTGCGACTGT
GGTGCCCAGC TGCAGGCGGC ATTGCAGGCC ATCGCCAGCG AAGGCCGCGG CGTGCTGCTC
TACCTGCGCC AGGAAGGCCG CGGCATCGGT CTGCTGAACA AGATCCGCGC CTACGAGCTG
CAGGACGGCG GCGCCGATAC CGTGGAGGCC AACGAGCGCC TGGGCTTCGG CGCCGACCAG
CGCGACTACG CCATCTGCCT GCCGATGCTC GAGCACCTGG GCATCAAGAG CCTCAAGCTG
ATGACCAACA ACCCGCGCAA GGTCAGGGCG CTGGGTGAAA TGGGCATCGC CGTGGACCAT
CGCGTGCCGC TGCAGATCGC GCACAATCCC TACAACAAGC GCTACCTCGC CACCAAGGCC
GGCAAGCTCG GCCACATGCT GGGCAACCAG CATCAGGGCG AGACCGAGGA AAGCCTGTGA
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| Protein sequence | MPPLFRTHCQ EHPVSVVFVA ASQLPTPFGV FTMHGFLDEA TGKEHVALTF GDVADGAPVL
GRLHSECLTG DALFSLRCDC GAQLQAALQA IASEGRGVLL YLRQEGRGIG LLNKIRAYEL
QDGGADTVEA NERLGFGADQ RDYAICLPML EHLGIKSLKL MTNNPRKVRA LGEMGIAVDH
RVPLQIAHNP YNKRYLATKA GKLGHMLGNQ HQGETEESL
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