| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3834 |
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| Symbol | |
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| ID | 5106064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4221358 |
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| End bp | 4222587 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505088 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001189313 |
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| Protein GI | 146308848 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.94343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC TGTATCTGCA CAACCTGCGT TTGCCGGACG CGCCCACCCG CCTCACCGAG
CTGCGGGTGG AACAGGGCCG CTTCGTCGAT GCCTTCAGCG CCGACGCCTG CCCGCGCGAG
CTGGACCTGG GCGGCGGCCT GGTGCTGCCG GGGCTGATCG AAACCCATAT CCATCTGGAC
AAGGCCTGCA TCCTCGAACG CTGCAGCCTG CGCGCCGGCA CCCTGGCCGA GGCCATCGCC
GAAACCTCGG CGGCCAAGGC CGGCTTCACC GAGGCGGATG TCTACCAGCG CGGCGCACGG
GTGCTGGAGC TGGCCATCGC CCAGGGCACC ATGCACATGC GCACCCACGT CGAGATCGAC
CCGCAGATCG GCCTGACCGG TTTCAACGCG GTGCGCCGGC TGCAGGCCGA CTACGCCTGG
GCGCTGGACC TGCAGCTCTG CGTGTTCCCC CAGGAGGGCC TGCTCAACAA TCCGGGCACC
GAGGCGTTGC TGTGCCAGGC GTTGGCGCAG GGCGCCGAGG TGCTCGGCGG CTGCCCCTAT
ACCGACAGCG ATCCGCATGG GCAGATCCGC CGCTTGTTCG AGCTGGCCGT GGCGCACGAT
TGCGATCTGG ACTTCCACCT GGACTTCGAC CTCGACCCCG CGGGCATGAC CCTGCCCGAG
GTGCTGCGCT GTACCGAGCG GCACGGCTGG GGCGGCCGGG TTACCGTCGG CCACGCCACC
AAGCTGTCGA TGCTGGCGGC CGAGCCGCTG CAGGCGATCA CTGCGCAACT GGCCGCGGCC
GGGGTGCAGG TGACCTGCCT GCCGAGCACC GATCTCTACC TCGGCGGCCG CCAGTGCAGC
CATGGCAAAC CGCGCGGGCT GGCGCCGCTG GAGCGCTTGC ACGCCGGCGG GGTGACCTGT
TCGCTGTCGA CCAACAACCT GGGCAACCCC TTCACCCCCT ACGGCGACGC CTCGCTGATC
CGCCAGGCCA ACCTCTACGC CAACGTCGCC CAGCTCGGCA CCCACGCCGA GCTGCAGACC
TGCCTGGGCT GGATCTCCAG CGACTCGGCG CGTTTGCTGC GCCTGCGCGA CTACGGCCTG
GCACCGGGAT GCCGGGCGGA CTTCATCGTC CTCGATGCAC CGCACCCGGC GGCGGTAATC
GGCGAGCTGA GCCCGCCACT GCTGGGCTTC AAGAACGGTC GGCAGACCTT CGTACGGGAA
CGGCCACGGC TGCTGCGGCC GAGTGATTAG
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| Protein sequence | MSALYLHNLR LPDAPTRLTE LRVEQGRFVD AFSADACPRE LDLGGGLVLP GLIETHIHLD
KACILERCSL RAGTLAEAIA ETSAAKAGFT EADVYQRGAR VLELAIAQGT MHMRTHVEID
PQIGLTGFNA VRRLQADYAW ALDLQLCVFP QEGLLNNPGT EALLCQALAQ GAEVLGGCPY
TDSDPHGQIR RLFELAVAHD CDLDFHLDFD LDPAGMTLPE VLRCTERHGW GGRVTVGHAT
KLSMLAAEPL QAITAQLAAA GVQVTCLPST DLYLGGRQCS HGKPRGLAPL ERLHAGGVTC
SLSTNNLGNP FTPYGDASLI RQANLYANVA QLGTHAELQT CLGWISSDSA RLLRLRDYGL
APGCRADFIV LDAPHPAAVI GELSPPLLGF KNGRQTFVRE RPRLLRPSD
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