| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3829 |
|---|
| Symbol | |
|---|
| ID | 5106060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4216893 |
|---|
| End bp | 4217420 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640505084 |
|---|
| Product | inorganic pyrophosphatase |
|---|
| Protein accession | YP_001189309 |
|---|
| Protein GI | 146308844 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0221] Inorganic pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.457968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACA GCAAGATCCC GGCTGGCAAA GACCTGCCGA ACGACATCTA CGTTGCCATC
GAGATCCCGG CCAATCACGC GCCGATCAAA TACGAAATCG ACCACGACAG CGACTGCCTG
ATGGTCGATC GCTTCATGGC CACCCCGATG TTCTACCCGG CCAACTACGG TTTCATCCCG
CACACCCTGG CTGACGACGG CGACCCCCTC GACGTGCTGG TCGTGACCCC CTACCCGGTC
GCTCCGGGTT CGGTGATCCG CGCTCGTCCG GTCGGCGTAC TGCACATGAG CGACGAAGCC
GGCGGCGACG CCAAGCTGGT TGCCGTTCCG CACGACAAAC TGACCGTTCT GTACAAGGAC
GTTCAGGAAT ACACCGACCT GCCCCCGCTG CTGATCGAGC AGATCAAGCA CTTCTTCGAG
AACTACAAGG ATCTGGAGAA GGGCAAGTGG GTCAAGGTAG AAGGCTGGGG CGGCGCTGAA
GAAGCCCGCG GCCTGATCAA CAAGGCAGTC GCGGCTTACC AAAAATAA
|
|---|
| Protein sequence | MSYSKIPAGK DLPNDIYVAI EIPANHAPIK YEIDHDSDCL MVDRFMATPM FYPANYGFIP
HTLADDGDPL DVLVVTPYPV APGSVIRARP VGVLHMSDEA GGDAKLVAVP HDKLTVLYKD
VQEYTDLPPL LIEQIKHFFE NYKDLEKGKW VKVEGWGGAE EARGLINKAV AAYQK
|
|---|
| |