| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3826 |
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| Symbol | |
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| ID | 5106057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4213699 |
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| End bp | 4215054 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505081 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_001189306 |
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| Protein GI | 146308841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCC ATATTCTCGG CATCTGCGGC ACCTTCATGG GCTCGCTCGC CGTTCTGGCC
AAGGAACTCG GCCACCGCGT CACCGGCTCC GACGCCAATG TCTATCCGCC CATGAGCACC
CAGCTCGAAG CCCAGGGCAT CGAACTGATG CAGGGTTATG ACCCGGCGCA CCTGCAGCCA
GCGCCCGATC TGGTAGTGGT CGGTAACGCC ATGAGCCGCG GCAATCCGGC AGTCGAATAT
GTATTGAACA AGGGCCTGCC CTACGTTTCC GGCCCGCAGT GGCTGGCCGA CCATGTGCTG
CAGGGGCGCT GGGTGCTGGC GGTGGCCGGC ACGCACGGCA AGACCAGCAG CTCGAGCATG
CTGGCCTGGG TGCTGGAGCA TGCCGGCATG AGCCCGGGCT TTCTGATCGG CGGCGTGCCG
CAGAACTTCG GCATTTCTGC ACGGCTAGGC GATACGCCGT TCTTCGTGGT CGAGGCCGAC
GAGTACGACA GCGCCTTCTT CGACAAGCGC AGCAAGTTCG TCCACTACCG CCCGCGCACG
GCGATCCTCA ATAACCTGGA ATTCGATCAC GCGGACATCT TCCCGGATCT TGCGGCCATC
GAACGGCAGT TCCACCATCT GGTGCGCACC ATCCCCAGCG AGGGCCTGGT CATCCACCCG
GCCAGCGAAA CCGCGCTGGC GCGGGTGATC GAGATGGGCT GCTGGACGCC TGTGCAGACC
ACCGGCGAAG ACGGGCAGTG GCAGGCACGC CTGCTCAGCG CCGATGGCTC GCGCTTCGAG
GTGAGCTTCG AGGGCAAGGT CGAGGGCGTG GTGGAGTGGC AACTGACCGG CCAGCACAAC
GTTGCCAACG CCCTGGCCGT GCTCGCGGCG GCGCGCCATG TCGGTGTGGT GCCGGCGCTG
GGCATCGAGG CGCTGGGCAA GTTCATCAAC GCCAAGCGGC GCATGGAGAA GGTTGCCGAG
GTCAGCGGCG TGACCATCTT CGACGATTTC GCCCACCATC CCACGGCCAT CGCCACCACG
CTCGATGGCC TGCGCAAGCG TGTCGGCGAT GACACCCAGG TGATCGCAGT GATCGAGCCA
CGCTCCAATT CGATGAAGCT CGGTGCTCAT CGCGACGGCC TGGCCGAGTC AGCCGAGCAG
GCCGATGCGG TGTTCTGGTA CGCGCCGCCG AATCTCGGCT GGGACCTGGC TGCCACCGTG
GCGCAGGCGC GCAATCCGAC GCGTGTATGC GACTCGCTGG AATCGATCAT CGACGGCGTG
AAGGCCCTGG CGCGCCCCGG CACCCAGGTG GTGATCATGA GCAACGGCGG CTTCGGCGGC
CTGCATGGCA AGCTGGCAGC AGCTCTGGAG GGATAG
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| Protein sequence | MHIHILGICG TFMGSLAVLA KELGHRVTGS DANVYPPMST QLEAQGIELM QGYDPAHLQP
APDLVVVGNA MSRGNPAVEY VLNKGLPYVS GPQWLADHVL QGRWVLAVAG THGKTSSSSM
LAWVLEHAGM SPGFLIGGVP QNFGISARLG DTPFFVVEAD EYDSAFFDKR SKFVHYRPRT
AILNNLEFDH ADIFPDLAAI ERQFHHLVRT IPSEGLVIHP ASETALARVI EMGCWTPVQT
TGEDGQWQAR LLSADGSRFE VSFEGKVEGV VEWQLTGQHN VANALAVLAA ARHVGVVPAL
GIEALGKFIN AKRRMEKVAE VSGVTIFDDF AHHPTAIATT LDGLRKRVGD DTQVIAVIEP
RSNSMKLGAH RDGLAESAEQ ADAVFWYAPP NLGWDLAATV AQARNPTRVC DSLESIIDGV
KALARPGTQV VIMSNGGFGG LHGKLAAALE G
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