| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3816 |
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| Symbol | |
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| ID | 5106047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4202425 |
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| End bp | 4204335 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640505071 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001189296 |
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| Protein GI | 146308831 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTG ACGCTCATCT CTCCGCCGTT CCCCTGCAGT CCTGGCTGCG CATCCAGCGC
GAGGCGCCGC CGCTGGGCGA GCGGGCCGAG GCCCTACGCC AGGCTCTGCT GGGTTGCCCG
CAGGTGCGCC AGGCCTGGTA CCTGGCCTGG CAGCCGGCCA GTCGCACCTA CGCTCAGGTG
GACGGAGGAC CGCGCCTGCC GCCGGGCATG GGCGACCCGC TGGAGGCCAG TGACGAGACG
CTGTTCGCCG CGCTTGGCGA ACAATCGAGC CTGCCCTTCG ACGCCCTGCG CCGGCTGCCC
TGCTGGCTGG CCGGGCGTCT GCGCCGCGCC GCGCTGCATC ATGGCCAGGC GCTGGCCCTG
CAGCTGCAGC CCGGCCAGCC CGGCGTGCTG CTATTGCAGG TCGACGAGGC GGCCGGGCTG
GAATGGCTGC CCTGGCTGCG TGAACTGCTG GTGCAGATGG TCGAACTGGC CTCGGGGCTG
GCGCGCAGTG CTCCGTTGCT GTCGGCCGAC CCGCAGCCGG CGCTGCTGCT CGACGCCGAG
GCGCGCCTGC TGGAAAGCAA TGCGGCGCTG CAGGCGCTGC TCGGCGAGCG CGCGCTGGCT
CAGGTTGGCG AGCTGTTGCC GGTCAACCAT CTGCCGCTGG TGCGCGCCTG CCTGGAGCAA
TGCAGGGCCA TCGAGGCGGT GGAGGCGCAG GACGGCGAGC GAATCCTGAT CTGGAGTTTC
GTCCCCGATG TCGCCGAGCG CCGCGTGCTG GCGCGCTGCC GCGAGGCCAC CCGCGAGGTC
CGCGAACAGC GCGAGGCCGC GCGGGCGCGG CGGCTGTACC GGCTGATCAC CGAGAACACC
ACCGACCTGA TTTCCCGGCA TACGCCGGGC GGCGTGTTTC TCGACGCCTC GCCGGCCTGC
TGGACGCTGC TCGGCTACTG GCCGGAAGAA CTGCGTGGCA TGGCGGTCGA CGGCCTGCTG
CATCCACAGG ACCAATTGCA GCAGGCCAAG CAGGCGCGCG AGGCGCTGGA GCAGGACGGT
TATCACACCA TGACCTACCG CATCCGCCAC CGCGACGGCC ACTACCTGTG GTTCGAGACC
GCCAGCCGCG CCATTCGCGA GACCTACACC GGCGCGGTGG TGGAGGTGGT CAGCGTGTCG
CGCGACATCA CCGCGCGCAT CCAGGCCGAG GAGAACAAGC GCCGCCTGGA GGACGAGCTG
GCGCACACCA CGCGGCTGAT CACCCTGGGC GAGCTGGCCT CGGGCATCGC CCACGAGATC
AACCAGCCGC TGGCGGCGGT GGTCAACTAC GCCAGCGCCA GCCAGCGCTA CCTGCAGGGT
ATCGGCGGCG ATCCGGCCGG TGTCGACAAG GTGGCCCAGG GCCTGGCGCG CATCACCGAA
CACGCCAACC ACGCCGCGGT GGTGATCAGG CGTTTGCGCG CCTTCCTGCG CAAGGGCCAG
CGGCGCATGC AGGCGCTGAA CCTGGCTGAG GTGGCGCATG AGGCGGTGCG TCTGTGCAAC
TGGGAGGCCG GTGCGGCTCA GGTGGCGGTC AGCGACGTCT TGCCGGACAA TCTGCCACCG
GTATTCGCCG ACCGCGTCCT GCTCGAGCAG GTGCTGCTCA ACCTGCTGCG CAATGCCATC
GATGCCAACC GCGAGCGCCA CCCGGGCGCG CCTTCGCAGG TGCGACTGGA GGCCGGCGAG
TGCGACGGCG GCCTGGCGAT CCGGGTGATC GATCAGGGGC CGGGCGTCAG CGACGAGCAG
ATGGCCAAGC TGTTCACCCC CTTCTACACC AGCAAGGCGG ACGGCCTGGG GCTCGGCCTG
TCCATGAGCC GCAGCATCGT CGAAGGCTTT GGCGGGGCGC TGGAAGCCTT TCCGGCCGAG
GGCGGCGGGC TGTGCCTGGA ATGCCGCTTG CCGCTGGGCA GGGACGAGTA G
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| Protein sequence | MKTDAHLSAV PLQSWLRIQR EAPPLGERAE ALRQALLGCP QVRQAWYLAW QPASRTYAQV
DGGPRLPPGM GDPLEASDET LFAALGEQSS LPFDALRRLP CWLAGRLRRA ALHHGQALAL
QLQPGQPGVL LLQVDEAAGL EWLPWLRELL VQMVELASGL ARSAPLLSAD PQPALLLDAE
ARLLESNAAL QALLGERALA QVGELLPVNH LPLVRACLEQ CRAIEAVEAQ DGERILIWSF
VPDVAERRVL ARCREATREV REQREAARAR RLYRLITENT TDLISRHTPG GVFLDASPAC
WTLLGYWPEE LRGMAVDGLL HPQDQLQQAK QAREALEQDG YHTMTYRIRH RDGHYLWFET
ASRAIRETYT GAVVEVVSVS RDITARIQAE ENKRRLEDEL AHTTRLITLG ELASGIAHEI
NQPLAAVVNY ASASQRYLQG IGGDPAGVDK VAQGLARITE HANHAAVVIR RLRAFLRKGQ
RRMQALNLAE VAHEAVRLCN WEAGAAQVAV SDVLPDNLPP VFADRVLLEQ VLLNLLRNAI
DANRERHPGA PSQVRLEAGE CDGGLAIRVI DQGPGVSDEQ MAKLFTPFYT SKADGLGLGL
SMSRSIVEGF GGALEAFPAE GGGLCLECRL PLGRDE
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