| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3812 |
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| Symbol | |
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| ID | 5106043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4200008 |
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| End bp | 4200649 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505067 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001189292 |
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| Protein GI | 146308827 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.627598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGA CCCCGCAACA TATCCTGCTC GCTGGCGCCA CCGGCCTTAC CGGCGAACAT
CTGCTCGATC GTCTGCTCAG CGAGCCGACG GTCGCCCGCG TGCTGGCGCC GACGCGACGC
CCGCTGGCCT CCCATGCTCA TCTGGAAAAC CCGGTCGGCG ATCTGCAGGC CCTGCTGCCG
CAGCTCTCCG GCCAGGTCGA CACCGCCTTC TGCTGCCTGG GCAGCACCAT CAAGCAGGCC
GGCTCGCAGG AGGCCTTCCG CGCCGTCGAC CACGACCTGG TGCTGGCCTT CGCCCGTCGC
GCTCGCGAGC TGGGCGCACG GCATCTGGTG GTGATCAGCG CGCTGGGCGC CAACCCCAAC
TCCTCGGTGT TCTACAACCG CGTCAAGGGC GAAACCGAAC AAGCGCTGAA AGCCATGGAC
TGGCCGCAAC TGACCATCGC CCGCCCCTCG CTGCTGCTCG GTGCGCGCCG TGAGTTTCGT
CTTGGCGAGC GCCTGGCGGC GCCGCTGCTG CGCTGGCTGC CGGGCAAATA CCGCGGCATC
GACGCCTGCG CCCTGGCCCG CGCGCTGTGG CGCCTGGCGC TGGAGGAAGA AGACGGCGTG
CGCGTGATAG AGTCCTCCGA CCTGCGCCGC CTGGGGCGCT GA
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| Protein sequence | MHLTPQHILL AGATGLTGEH LLDRLLSEPT VARVLAPTRR PLASHAHLEN PVGDLQALLP
QLSGQVDTAF CCLGSTIKQA GSQEAFRAVD HDLVLAFARR ARELGARHLV VISALGANPN
SSVFYNRVKG ETEQALKAMD WPQLTIARPS LLLGARREFR LGERLAAPLL RWLPGKYRGI
DACALARALW RLALEEEDGV RVIESSDLRR LGR
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