Gene Pmen_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3810 
Symbol 
ID5106041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4197655 
End bp4198110 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID640505065 
Productdehydratase 
Protein accessionYP_001189290 
Protein GI146308825 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.511193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCG TACCCGTAGC AGAGCTCAAG GACTATGTTG GCAAGGAACT CGGCAAGTCC 
GAGTGGCTGA CCATCGACCA GCAGCGCATC AACCAGTTCG CCGAATGCAC CGGCGACCAT
CAGTTCATCC ACGTCGACCC GGAAAAGGCC AAGCTGACCC CCTTCGGCAC CACCATCGCG
CACGGTTTCC TGTCGCTGTC GCTGGTACCG ATGCTGATGG AAGGCATCAT GATCATGCCG
CAGGGCCTGA AGATGGCGGT GAACTATGGC CTCGACAGCG TGCGCTTCAT CCAGCCGGTG
AAGGTCGACT CCAAGGTGCG CCTGACGGTG ACCCTGACCG ACGCCAACGA AAAGAACCCC
GGCCAGTGGC TGCTCAAGGC CCGCGCCGTG CTGGAGATCG AAGGTCAGGA GAAGCCGGCC
TATATCGCCG AACCGCTGAC CCTCTGCTTC GTCTGA
 
Protein sequence
MPFVPVAELK DYVGKELGKS EWLTIDQQRI NQFAECTGDH QFIHVDPEKA KLTPFGTTIA 
HGFLSLSLVP MLMEGIMIMP QGLKMAVNYG LDSVRFIQPV KVDSKVRLTV TLTDANEKNP
GQWLLKARAV LEIEGQEKPA YIAEPLTLCF V