| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3808 |
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| Symbol | |
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| ID | 5106039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4196332 |
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| End bp | 4197048 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505063 |
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| Product | LrgB family protein |
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| Protein accession | YP_001189288 |
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| Protein GI | 146308823 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCGG ACTGGCAGGG CGCCTGGCAG GCGCTGATAC ATCACCCGCT GTTCGGTGTC
GGCATCACCC TGGGCGCCTA TCAGCTGGCC GTTGCCGCCT ATGAACGTAC GCGCTGGGTA
TTCCTGCAGC CGGTGCTGGT ATCGATGCTC ACGGTGATCG GCATTCTGCT GCTGTGCGGT
TTGAGCTTCG CCGAATACCG CAGCAGCGTT TCGCTGCTGA CCCTGCTGCT CGGCCCGGCC
ACGGTGGCGC TGGCGGTGCC GCTGTATCTC AACCTGCGGC GAATTCGCCA GTTGTTCTGG
CCAATCATCC TTACCCTGTC GATCGCCGGC ACCTTGGCTA CGCTGTTGGG AGCCGGGCTG
GCCTGGCTGT TCGGCGCCGA GCGGCTGATG CTGATGAGCA TGGCGCCGAA ATCCGTGACC
TCGCCGATCG CCATGCTGGT GGCCGAGCAG ATCGGCGGCA TCGCCGCGCT GGCGGCGGTG
TTCGTGATGA TCACCGGGGT CATCGGTGCC ATGGTCGGAC CTTCGCTGCT GCGTCTGTGC
GGCGTGCGTC ATCCGGCGGC GCTGGGCATG GCGCTGGGCA TCACCGCCCA TGCCGTAGGC
ACGGCGCGGG CGCTGCAGGA GAGCGACGAG TGCGGCGCCT TCGCCGCCCT GGCCATGAGC
CTGATGGGCG TGATCACCGC GGTGCTGTTG CCGCTGGCGA TTGTCCTGTT CTTATGA
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| Protein sequence | MSPDWQGAWQ ALIHHPLFGV GITLGAYQLA VAAYERTRWV FLQPVLVSML TVIGILLLCG
LSFAEYRSSV SLLTLLLGPA TVALAVPLYL NLRRIRQLFW PIILTLSIAG TLATLLGAGL
AWLFGAERLM LMSMAPKSVT SPIAMLVAEQ IGGIAALAAV FVMITGVIGA MVGPSLLRLC
GVRHPAALGM ALGITAHAVG TARALQESDE CGAFAALAMS LMGVITAVLL PLAIVLFL
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