Gene Pmen_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3803 
Symbol 
ID5106034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4191518 
End bp4192747 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content70% 
IMG OID640505058 
Productalpha/beta hydrolase fold 
Protein accessionYP_001189283 
Protein GI146308818 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTACC GCACCGACTA TAGCGCCGCC CTGCTCGTCA GCCCGCCCGA GGTCCTGGAG 
ATCGCTGGCT GGCGTCTGCA TTACCAGGCT TACTCCACCC GCCAGCACGA CCCGCGCCAG
CCGGTGCTGC TGCTTGGCGG TGCGTTCCAG AGCTTTCGCT CCTTCGCCGC CGAGGTGGAG
GAGCTGCTGC CGAGCCATCC GCTGATCCTG CTCGACCTGC CCAGCCAGGG CGGCAATATG
CAACTGGCGC CGGAGCTCGG CCTGGAGCAA CTGGCCGACC TGATCGCCGC CTTCGCCGAA
CAGCTGCAGC TGCCGACACT GATGCCCATC GGTCTGTCCT ATGGCTCGGC GCTGGCGGCC
CTGTTCGCCG CCCGTCACCC GCAACGCTGC GCGCGCTTGC TGCTGGCCGG GGTCACCGCC
TTCGGCCGCC CCGGCGCGCG ACTGCTGCTG GAAGAGGGCC TGGCCCTGCT CGATGAGGGA
CGCATCGGCG AGTTCGCCCA GGGTGCCCTG ACCGGCCTGC TCAACCCGCT GCATCTGCAG
GACACGGGCG TTTCACCGGT GTTTCGCAAG GCGCTGCTGC GGCAGATCCA GCGCCTGTCG
CCGACCGAGG TGGAGCGCTA CCGGCAGAAC AGCCGACGCC TGCTGGCCTT CGCCGGCTTC
GAGCGCCACC CGCTATGCCC GACCCTGGTG CTGGCCGGTG AGCACGATCA TTTCACCCAG
CCCTGGGAAC ACGCCCATTT CGCCGCGGCC TGCGCCCAGG CCGATTGCGC CCTGATCCAC
CAGGCCGATC ATCTTGCCCA GTTCGAACGA CGTGAAGCCT GCGCCGCGCT GTACCGACCC
TTCCTCGATG GGCGATCGCT GCCGGCACGC AGCTCGGGCA GCACGCGCCT GCAAGCCGAG
CAGCTCCTGA AGCTGGAGAA ACGTTGCGAG CCGCGCCTGG CGCCACGCCA GCGTCAGGCA
CTGCTGCAGC ATGCCGAAGG CCGGCAATGG ACGGTGGAGC TGAGCGAGCT GGGCTTCTTC
GGCGGGCTGC TGCAAGGCGA CCTGCCGCGG GATCTGCCTG GGCGGGGCTG GCAGCTGAGT
TATGCGGATC TGCCCAGCCA GCCGCTGCTA CCGCTGCGCC ACGAAGACAG GGGCCTGGCC
TTCGTCTTCC CGCATACCGA TGCCGAGGCC AGCCAGGCCC TGGCCGCGCG CATCCATCCG
GCGCCGCTGC CGGCAGCGGC CTGCGCCTAG
 
Protein sequence
MHYRTDYSAA LLVSPPEVLE IAGWRLHYQA YSTRQHDPRQ PVLLLGGAFQ SFRSFAAEVE 
ELLPSHPLIL LDLPSQGGNM QLAPELGLEQ LADLIAAFAE QLQLPTLMPI GLSYGSALAA
LFAARHPQRC ARLLLAGVTA FGRPGARLLL EEGLALLDEG RIGEFAQGAL TGLLNPLHLQ
DTGVSPVFRK ALLRQIQRLS PTEVERYRQN SRRLLAFAGF ERHPLCPTLV LAGEHDHFTQ
PWEHAHFAAA CAQADCALIH QADHLAQFER REACAALYRP FLDGRSLPAR SSGSTRLQAE
QLLKLEKRCE PRLAPRQRQA LLQHAEGRQW TVELSELGFF GGLLQGDLPR DLPGRGWQLS
YADLPSQPLL PLRHEDRGLA FVFPHTDAEA SQALAARIHP APLPAAACA