| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3801 |
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| Symbol | nadD |
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| ID | 5106032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4189186 |
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| End bp | 4189845 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505056 |
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| Product | nicotinic acid mononucleotide adenylyltransferase |
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| Protein accession | YP_001189281 |
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| Protein GI | 146308816 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1057] Nicotinic acid mononucleotide adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGGTA TTGGCGCCCG ACGTATCGGC CTGCTCGGCG GTACCTTCAA CCCGGTGCAC
AACGGGCATC TGCGTGCGGC GCTGGAAGTG GCCGAGTTCA TGGCGCTGGA CGAGCTGCGG
CTGATCCCCA GCGCGCGGCC GCCGCACCGC GACGCGCCAC AGGCGAGCGC CGAGCAGCGC
TTGGCCATGG TTCGCCTGGC AGTGGCCGAC GAGCCGCGGC TGACGGTCGA TGACCGTGAG
CTCCAGCGCG ACAAGCCGTC GTACACGGTG GACACCCTGG AGTCGGTGCG CGCCGAGCTG
GCGGCGGACG ATCAGCTGTT TCTGCTGCTC GGCTGGGATG CCTTCTGCGG GTTGCCGAGC
TGGCACCGCT GGCAGGAGTT GCTCGATCAC TGTCACCTGC TGGTGCTGCA GCGGCCGGAT
GCCGACAGCG AGGCGCCGGA GGCGCTGCGC GATCTGCTGG CGGCGCGCAG TGTCAGCGAC
CCGCTGAGCC TGGCCGGGCC GGGCGGGCAA ATCAGTTTCA TCTGGCAGAC TCCGCTGGCG
ATATCCGCCA CGCAGATTCG CCACTTACTG GCAACCGGCC GCTCGGCGCG CTTTCTGCTG
CCCGATGCGG TACTGGCCTA TATCCAGGCG CACGATCTTT ACCGTGCGCC CAATGCTTGA
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| Protein sequence | MNGIGARRIG LLGGTFNPVH NGHLRAALEV AEFMALDELR LIPSARPPHR DAPQASAEQR
LAMVRLAVAD EPRLTVDDRE LQRDKPSYTV DTLESVRAEL AADDQLFLLL GWDAFCGLPS
WHRWQELLDH CHLLVLQRPD ADSEAPEALR DLLAARSVSD PLSLAGPGGQ ISFIWQTPLA
ISATQIRHLL ATGRSARFLL PDAVLAYIQA HDLYRAPNA
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