Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3798 |
Symbol | |
ID | 5106029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4186392 |
End bp | 4188284 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505053 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_001189278 |
Protein GI | 146308813 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.624413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAGC CGATTCGTCT CAAGGATCAT GAAAAGGACG CCCGCCTGGT CAAGCGCCGG GTGGTGTTCT GTGCTGTGGC AATCATCGTG CTCACCTGCC TGCTGATCAT GCGCATGTAC TACCTGCAGG TGGTTCAGTA CGAGTATCAC TCCACGCTGG CCGAGAACAA CCGCATCCAC GTGCAGCCGA TTCCGCCGAC GCGCGGGCTG ATCTTCGACC GTAACGGGGT GATCATCGCC GACAACCGAC CGAGCTTCAG CCTGACCGTT ACCCGCGAGC GTGCCGGCGA CTGGCTGAGC GTGCTCGATA CCGTGGTCGA GGTACTGGAG CTTTCCGCGG ACGAGCGCGC GCTGTTCGAG CGCCGCGTGC GCCAGGGGCG GCGGCCCTTC GAGCCGGTGC CGATCCTGTT CGAGCTGTCC GAGGAGCAGA TCGCCCGCAT CGCGGTCAAC CAGTTCCGCC TGCCCGGCGT CGAGGTGGCG GCGCAGCTGG TGCGGCATTA TCCGCAGCAG GAGCACTTCG CTCATTCGGT CGGCTATGTC GGTCGCATCA ACGAGCAGGA ACTCAAGCGT CTCGATCCGA CCGACTACGC CGGCACCCAC CATATCGGCA AGACCGGCAT CGAGCGCTTC TACGAAGACG AGCTGCACGG CGAAGTGGGT TACGAAGAAG TCGAGACCAA CGCCCGTGGC CGCGTACTGC GGGTGCTCAA TCGCATCGAC CCGAAGCCGG GCAAGGACAT CGTCCTGAGC CTCGACGTGC ACCTGCAGGA GGCCGCCGAG AACGCCCTGG GCGGCCGCCG CGGTGCGGTG GTGGCGATCG ACCCGAACAA CGGCGAGGTG CTGGCGATGG TCAGTCAGCC CAGCTTCGAT CCCAACCCCT TCGTCACCGG CATCAGCTTC AAGGCCTATG GCGAGCTGCG CGACTCAATC GACCAGCCGC TGTACAACCG CGTGCTGCGC GGCCTCTATC CGCCGGGCTC GACCATCAAG CCGATGGTCG CCGTGGCCGG CCTCGATGCC GGCGTGGTCA CGCCCACCTC GCGGGTGTTC GACCCAGGCT TCTATCAGTT GCCCAATCAC AGCCACAAGT ACCGTAACTG GAACCGTACC GGTGACGGCT GGGTCGATCT CAACCTGGCC ATCGCCCGTT CCAATGACAC CTACTTCTAC GATCTGGCGC ACAAGATGGG CGTCGATCGC ATGCACGACT ACATGAGCCG CTTCGGCCTC GGGCAGCGCG TGGCGCTGGA CATGTTCGAG GAAACCGCGG GCCTGATGCC CTCGCGCGAC TGGAAGCGGG CGCGTTATCG CCAGCCCTGG TACCCCGGCG AAACCCTGAT TCTCGGTATT GGCCAGGGCT ACATGCAGAC CACGCCGCTG CAGCTGGCGC AGGCTACCGC GCTGATGGCC ACCCGCGGCA AGTGGATACG TCCGCACCTG GCCAAGAGTG TCGATGGCCG CCTGCCCGTA GACCCGAATC CTATGCCGGA TATCGTGCTG CGCGATCCGA AGTTCTGGGA ATACGGCATC CGCGGCATGG AAGATGTGCT GCACGGTGCC CGCGGCACCG CGCGCAAGGT CGGCGAGAGT TCGGTCTATC GCATCGCCGG CAAGAGCGGT ACCGCGCAGG TGGTGGCAAT CAAGCAGGGC GAGAAGTACG ACCGCAACAA GGTCCAGGAG CGCCACCGCG ACCACGCGCT GTTCGTCGCC TTCGCCCCGG TGGAGAACCC GCAGATCGCC GTGGCGGTGA TGGTGGAGAA CGGTGAATCC GGCTCTGGCG TCGCCGCGCC GGTGGTCAAG CAGGTGATGG ACGCCTGGTT GCTGGATCAG CAGACGGGCC AGCTCAAGGC CGAGTTCGCG CAGCCGAAGA ACGCCGAGGT CAGTCAGCGA TGA
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Protein sequence | MPQPIRLKDH EKDARLVKRR VVFCAVAIIV LTCLLIMRMY YLQVVQYEYH STLAENNRIH VQPIPPTRGL IFDRNGVIIA DNRPSFSLTV TRERAGDWLS VLDTVVEVLE LSADERALFE RRVRQGRRPF EPVPILFELS EEQIARIAVN QFRLPGVEVA AQLVRHYPQQ EHFAHSVGYV GRINEQELKR LDPTDYAGTH HIGKTGIERF YEDELHGEVG YEEVETNARG RVLRVLNRID PKPGKDIVLS LDVHLQEAAE NALGGRRGAV VAIDPNNGEV LAMVSQPSFD PNPFVTGISF KAYGELRDSI DQPLYNRVLR GLYPPGSTIK PMVAVAGLDA GVVTPTSRVF DPGFYQLPNH SHKYRNWNRT GDGWVDLNLA IARSNDTYFY DLAHKMGVDR MHDYMSRFGL GQRVALDMFE ETAGLMPSRD WKRARYRQPW YPGETLILGI GQGYMQTTPL QLAQATALMA TRGKWIRPHL AKSVDGRLPV DPNPMPDIVL RDPKFWEYGI RGMEDVLHGA RGTARKVGES SVYRIAGKSG TAQVVAIKQG EKYDRNKVQE RHRDHALFVA FAPVENPQIA VAVMVENGES GSGVAAPVVK QVMDAWLLDQ QTGQLKAEFA QPKNAEVSQR
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