| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3774 |
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| Symbol | |
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| ID | 5105769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4162532 |
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| End bp | 4163821 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505029 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_001189254 |
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| Protein GI | 146308789 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0848252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCT CCGAAATCCT CTTCGCCAAT GCCCAGAAGC ACATCCCCGG CGGCGTCAAC
TCGCCGGTGC GCGCCTTCCG CAGCGTCGGC GGCACGCCGC TGTTCTTCAA ACACGCCGAA
GGCGCCTACG TAGTGGATGA AGACGACAAG CGCTACGTCG ACTACGTCGG CTCCTGGGGC
CCGATGATCC TCGGCCACAG CCATCCGGAC GTGCTCGACT CGGTACGTCG CCAGCTGCAG
CACGGCTTGT CCTACGGCGC GCCGACCGCG CTGGAAACCG AGATGGCCGA GCTGGTATGC
AGCCTGGTGC CGTCGATGGA GATGGTGCGC ATGGTCAGCT CCGGCACCGA GGCGACCATG
AGCGCCATCC GCCTGGCCCG TGGCTACACC GGCCGCGACA GCATCATCAA GTTCGAGGGC
TGCTACCACG GTCACTCCGA CAGCCTGCTG GTCAAGGCCG GCTCCGGTGC CCTGACCCAG
GGCGTGCCGA ACTCCGCGGG CGTGCCGGCG GCCTTCGCCA AGCACACCCT GACCCTGCCG
TTCAACGACA TCGACGCCGT GGCCGAATGC CTGGCGCAGG TGGGTAAGGA AGTCGCCTGC
ATCATCGTCG AGCCGGTAGC CGGCAACATG AACTGCGTGC CGCCGGCGCC GGGCTTCCTC
GAAGGCCTGC GCGAGCAGTG CGACAAGCAC GGCGTGGTGC TGATCTTCGA CGAGGTGATG
ACGGGTTTTC GCGTCGCCCT TGGCGGTGCG CAAGCGCACT ACGGCGTCAC TCCGGACCTG
ACCACCTTCG GCAAGATCAT CGGCGGCGGC ATGCCGGTGG GCTGCTTCGG CGGCAAGCGC
GCGATCATGG AATGCATCGC CCCGCTCGGC CCGGTGTACC AGGCCGGCAC CCTGTCGGGT
AACCCGCTGG CCATGGCCGC CGGCCTGACC ACGCTGAAGC TGATCAGCCG TCCGGGCTTC
CACACCGAGC TGAGCGACTA CACCACGCGC ATGCTCGATG GCCTGCAACA GCGCGCCGAT
GCCGCCGGCA TCCCCTTCGT CACCACCCAG GCGGGCGCCA TGTTCGGCCT GTATTTCAGC
GGCGCCGACG ACATCGTCAC CTTCGCCGAC GTGATGGCCA GCGACAGTGC GCGCTTCAAC
CGCTTCTTCC ACCTGATGCT GGAAGGTGGC GTGTACCTAG CGCCGAGCGC CTTCGAAGCG
GGCTTCACCT CCATCGCCCA TGGCGACAAG GAGCTGGAGA TCACCTTCGC CGCCGCCGAG
CGCGCCTTCG CCGAGCTGAA AAAAGCCTGA
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| Protein sequence | MSRSEILFAN AQKHIPGGVN SPVRAFRSVG GTPLFFKHAE GAYVVDEDDK RYVDYVGSWG
PMILGHSHPD VLDSVRRQLQ HGLSYGAPTA LETEMAELVC SLVPSMEMVR MVSSGTEATM
SAIRLARGYT GRDSIIKFEG CYHGHSDSLL VKAGSGALTQ GVPNSAGVPA AFAKHTLTLP
FNDIDAVAEC LAQVGKEVAC IIVEPVAGNM NCVPPAPGFL EGLREQCDKH GVVLIFDEVM
TGFRVALGGA QAHYGVTPDL TTFGKIIGGG MPVGCFGGKR AIMECIAPLG PVYQAGTLSG
NPLAMAAGLT TLKLISRPGF HTELSDYTTR MLDGLQQRAD AAGIPFVTTQ AGAMFGLYFS
GADDIVTFAD VMASDSARFN RFFHLMLEGG VYLAPSAFEA GFTSIAHGDK ELEITFAAAE
RAFAELKKA
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