| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3773 |
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| Symbol | thiE |
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| ID | 5105768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4161880 |
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| End bp | 4162509 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640505028 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001189253 |
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| Protein GI | 146308788 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0971718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGG CGCTGCGCGG CCTTTACGCC ATCACCGACA CCCCGCTGCT GGCCGGTGGC
AAGCTGCTGC CCTATGCCGA AGCGGCGCTG ATCGGTGGCG CGCGCCTGCT GCAGTACCGC
GACAAGTCGG GCGATGCCGT GCGTCGCCTC GATGAAGCCC AGGCACTGGC CGAGCTATGC
CAGCGCCATG GCGCCACGCT GATCATCAAC GATGATCTGG AGCTGGCCGC GCACTTGGGC
GTCGGCCTGC ACCTGGGCCA GACCGACGGC TCGCTGGCCG CCGCTCGCGC CCGCCTCGGC
GCCGACGTGG TAATCGGCGG TACCTGCCAC GCCCAGCTGG AGCTGGCCGA GCGGGCCGTC
GCCGAAGGTG CCAGCTATAT CGCCTTCGGC CGCTTCTTCA ACTCCAACAC CAAGCCCGGC
GCCCCGGCCG CCACCGTGGA GCTGCTGGAT CAGGCGCGCA CGCGCTTTGC CCAGCCCATC
GTCGCCATCG GCGGCGTGAC CCTGGATAAC GCCCCCGGCC TGATCGCCCG CGGCGCTAGC
ATGGTGGCCG TGATCCACGC CCTGTTTGCC GCGGACTCCG CCCTCGAGGT GCAAGACCGC
GCCCGCGCCT TCGCCGCGCT GTTCGATTGA
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| Protein sequence | MTAALRGLYA ITDTPLLAGG KLLPYAEAAL IGGARLLQYR DKSGDAVRRL DEAQALAELC
QRHGATLIIN DDLELAAHLG VGLHLGQTDG SLAAARARLG ADVVIGGTCH AQLELAERAV
AEGASYIAFG RFFNSNTKPG APAATVELLD QARTRFAQPI VAIGGVTLDN APGLIARGAS
MVAVIHALFA ADSALEVQDR ARAFAALFD
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