Gene Pmen_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3770 
Symbol 
ID5105765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4158945 
End bp4159691 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID640505025 
Producthypothetical protein 
Protein accessionYP_001189250 
Protein GI146308785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.137157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACC TCCACCACCT GCTCGATGTC ATTTCCCGCA GCCTGCCCGG GCTGCGGGGA 
CGGATCGGTG CGGCCGGCGC TGACCTGCTG GTGTGCGGCA GCGAGGGCAA TGCCCAGCGT
ATCGCCACGC TCTATCGGCA CTGGCGTCAG GCGCATCCCG AGGCCGGGCC GCATTACTGG
ACGGTGCGCA GCTGGACCTA TCTGGTCTGG CAACCCATCT ACCTGACACT GCTCGGCGTG
CATCTGGCGC AGCGCGCGCC CTGCCTGTCG AGCCTCGGGC AGTGCGTTGA GGGCGGTGTG
GTATCGGGTT TCTGCCTGGC CGAGCACTCC GTGCAACAGG CGGCGCAAGA CCAGCTGATC
GGCCTGGCCG CGCGCCAGCT GGACGATTGG CTGCGGCGCC AGCACGCCGA GTTCTGCCAG
GTGCAGAATA TTCACGGCAA GCTGGCCCAG CGCCTGGCGG CCGACTACGT GCTGGCAGCC
CTGCTGCTGG TGCAGCGTCA ACAGAACCTC GGCAACCAGC AGCTGCGCAC CCTGGCCGCG
CGCTGGCTGG ACGCGTTGGG CCTGCGCGGC GCCAGTGAGC TGCTCGAAGT ACGGCTGGAC
GATGGTCGCG ACTGCCTGAC CCTGGAGCGC AAGGCCTGCT GTCAGCACTT TCGCCGCGGC
GACGGCGAAC TGTGCAGCAC CTGCCCGAAG CTGCGGCGTG ACGAGCGCCT GCTGCGCCTG
CGCGAGGAGC TGGCCCTGGC ATGCTGA
 
Protein sequence
MQDLHHLLDV ISRSLPGLRG RIGAAGADLL VCGSEGNAQR IATLYRHWRQ AHPEAGPHYW 
TVRSWTYLVW QPIYLTLLGV HLAQRAPCLS SLGQCVEGGV VSGFCLAEHS VQQAAQDQLI
GLAARQLDDW LRRQHAEFCQ VQNIHGKLAQ RLAADYVLAA LLLVQRQQNL GNQQLRTLAA
RWLDALGLRG ASELLEVRLD DGRDCLTLER KACCQHFRRG DGELCSTCPK LRRDERLLRL
REELALAC