| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3758 |
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| Symbol | |
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| ID | 5105753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4142381 |
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| End bp | 4143535 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505013 |
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| Product | CRISPR-associated Cse4 family protein |
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| Protein accession | YP_001189238 |
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| Protein GI | 146308773 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.398681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGT TCGTCGAGTT TCACCTGATC CAAAACTTCG CCCCATCCAA CCTCAACCGT
GACGACACCG GCGCACCCAA GGATGCCCTG TTCGGCGGTC ATCGCCGCGC GCGGGTCAGC
AGCCAGTGCT TCAAGCGCGC CATCCGTCTG GCTGCCCAGG AGCATGAGCT GGTCGCCCCG
GAGTTTCGCG GCGTGCGTAC CAAGAAACTG AAGACACTGT TGCTGGAGCG CTTGGCTGGG
CGTGACCCGC TCGAAGCCGA GGGCAAGATC GAAGTGGCGC TGGCTGCTGC CGGCCTCAAG
CTCAAAGACG ATGGCAAGAC CGAATACCTG CTGTTTCTCG GCGAGGCAGA GATCGCCGGC
TTCGCCACGC TGATCGAGCA ACACTGGGAC GAGCTGGCCG GTGCCCCGGC AGGCGGCGAG
AAGAAGGGCG AGAAGAAGGG CAAGAAGGAA GCCAAGGCCA GCGCACCGGC CGAGGTAGTG
AAAAAGGCCA AGGCCCTGCT CGATGGTGGC AAGGCAGTGG ATGTGGCCTT GTTCGGCCGC
ATGCTCGCCG ATATGCCGGA GGTCAACCAG GACGCCGCCT GCCAGGTGGC CCATGCCATC
AGCACGCACC GCGTGGAGCG TGAGTTCGAC TACTTCACCG CCGTCGATGA CAAGGGCGGG
CCCGACGAAA CCGGCGCCGG CATGATCGGC CAGGTGGAGT TCAATTCCGC GACGCTGTAC
CGCTACGCGG TAGTCGATGC CGGCAAGCTG CTCGGCAACC TGCAGCAGGA TCGCGAGCTG
ACCCTTTCCG CCCTGGAGGC CTTCACTCAG GCCATGGTGC GCGCCATCCC GACGGGCAAG
CAGAACACCT TCGCCGCGCA CAACCTGCCA AGTTTCGTCG GCGTCTGCCT GCGCCATGCC
GGTCCGCTGA ACCTGGCCAA CGCCTTCGAG AAGCCTATCG CCGCACGTCA GGATGCCGCG
CTGAGCAGCC TGTCGGTCAC AGAACTGGCC AAGCACGAGG GCAAGCTGGC GGCGGTCTAT
GCCGATGCCA GTGATCAGTG GGCCTACCTC GATCTGAGCG AGGCCTGGCC GCAGCAGAAG
GGCTTTGCTG TGCAGAACCT GGGCGAATTG GCGAGCTGGG TACGTATGCA GGTCGCCGCG
CAACTGGAGG GCTGA
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| Protein sequence | MSLFVEFHLI QNFAPSNLNR DDTGAPKDAL FGGHRRARVS SQCFKRAIRL AAQEHELVAP
EFRGVRTKKL KTLLLERLAG RDPLEAEGKI EVALAAAGLK LKDDGKTEYL LFLGEAEIAG
FATLIEQHWD ELAGAPAGGE KKGEKKGKKE AKASAPAEVV KKAKALLDGG KAVDVALFGR
MLADMPEVNQ DAACQVAHAI STHRVEREFD YFTAVDDKGG PDETGAGMIG QVEFNSATLY
RYAVVDAGKL LGNLQQDREL TLSALEAFTQ AMVRAIPTGK QNTFAAHNLP SFVGVCLRHA
GPLNLANAFE KPIAARQDAA LSSLSVTELA KHEGKLAAVY ADASDQWAYL DLSEAWPQQK
GFAVQNLGEL ASWVRMQVAA QLEG
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