| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3755 |
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| Symbol | |
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| ID | 5105750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4140213 |
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| End bp | 4141127 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505010 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001189235 |
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| Protein GI | 146308770 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.44675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCCTC CACTCAAGCC CCTGCCGATG AAGGATCGGG TGTCGATGAT CTTCGTCCAG
TACGGGCAGA TTGACGTGCA GGACGGCGCC TTCGTGGTGA TCGACAAGAC TGGTGTGCGC
ATGCATATCC CGGTCGGCTC GGTGGCCTGC ATCATGCTCG AACCGGGCAC GCGGGTGTCC
CATGCCGCCG TGCATCTGGC TTCCACTGTC GGCACCCTGC TGGTGTGGGT GGGCGAGTCC
GGCGTGCGCC TGTATGCCAG CGGCCAGCCC GGTGGGGCGC GGGCGGATCG TCTGCTCTAC
CAGGCCAAGC TGGCGCTGGA TGACGAGCTG CGGCTGAAGG TAGTTCGCAA GATGTACGAG
CTGCGCTTTC AGGAGCCGGC GCCGGCCCGG CGTAGCGTTG AGCAATTGCG CGGCATCGAG
GGCTCGCGGG TGCGCGAGAC CTACAAGTTG CTGGCCAAGC AGTATGGTGT CGACTGGCGT
GCGCGAAACT ATGACCGCAA TGAATGGGAT GCAGCGGATA TCCCCAACCG TTGCCTGTCG
GCGGCCACGT CTTGTCTGTA TGGCATCACC GAGGCAGCCG TGCTTGCGGC GGGGTATGCG
CCTGCGGTGG GCTTCATCCA CACCGGTAAG CCCTTGTCTT TCGTCTACGA TATCGCGGAC
CTGTTCAAGT TTGAGACGGT AGTGCCGCTG GCCTTCCGCA TCGCTGCCAA GGCGCCCCAT
CAGCCCGAGC GTGAGGTGCG TCTGGGGTGT CGCGACCTGT TTCGCTCCAG CAAGATCCTG
GCGAAGATCA TCCCCACCAT CGAAGAGGTG CTGTCCGCTG GCGGTATCTC ACCGCCCGAG
GCGCCACCGG AGTCCGTACC ACCTGCTATC CCCAACCCAG AAAGCATCGG CGACGCCGGG
CACAGAGCGC AGTAA
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| Protein sequence | MLPPLKPLPM KDRVSMIFVQ YGQIDVQDGA FVVIDKTGVR MHIPVGSVAC IMLEPGTRVS
HAAVHLASTV GTLLVWVGES GVRLYASGQP GGARADRLLY QAKLALDDEL RLKVVRKMYE
LRFQEPAPAR RSVEQLRGIE GSRVRETYKL LAKQYGVDWR ARNYDRNEWD AADIPNRCLS
AATSCLYGIT EAAVLAAGYA PAVGFIHTGK PLSFVYDIAD LFKFETVVPL AFRIAAKAPH
QPEREVRLGC RDLFRSSKIL AKIIPTIEEV LSAGGISPPE APPESVPPAI PNPESIGDAG
HRAQ
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