| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3748 |
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| Symbol | |
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| ID | 5105743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4130740 |
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| End bp | 4132131 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640505003 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001189228 |
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| Protein GI | 146308763 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGTGC GGCGCATTGT ATGGGTAAAT CTTTATATTG CATGGCAAAC AATGTGGCTT
CCTGATCTGC AAGACAGCGC TCTGCCCACC TACCTCGCCC TGGTCGAGGC CATCGCCACC
GCCATCGGCC GCGGTGAACT CAAGCCCGGC GAACGCCTGC CGCCGCAGCG GCGCCTGGCC
TGGACGCTGG GCATCAATCC GAGCACGGTG ATGCTCGCCT ACCGCGAGGC GGCGCGTCGG
CATCTGGTCT CCGGCGAGGT CGGCCGCGGC ACCTACGTGC TGGCCGGCAG CCGCGAGGCG
AGCCTGTTCC GCCTCAAGCA ACCGGCTGCG CAGGGCGAGC TGATCGATCT GTCGACCAAC
GTGCCGGTGC ACGACCCGGA CAACCGCGAC CTGTCCGCCA GTCTCGCCGC GCTGGCCGCG
CGCGGCGAGC TGGATGCGCT GCAGGCCTAC CCGTCGGCGG CGCTGGTCGA GCGCGCCCAT
CTGGCCGGCG CCACCTGGCT GCGCCGTCGT GGCCTGGAGC TGGCGCCGAA CGGCCTGCTG
CTCTGCGCCG GTGCCCAGCA GGGCGTGTCG GCGGCGCTGC TGGCGCTGTG CGAGGCCGGC
GAGCCGATTC TGGTGGAGCG CTACACCGCG CCGGGGATCA AGGCCGCCGC GCGCCAGTTG
CGTCTGCCGC TGCATGGCGT GGCGATGGAC GAGCGCGGCA TCCTGCCCGA TGACCTCGAC
CGTCAGGCGC GTGCCACTGG CGCCCGTGTG GCGGTGCTTA CGCCCTGTTT GCAGAACCCC
ACCGGCGCCA GTCTGGACAC CGAGCGCCGC GCAGCCATTG CCGAGGTGGC GCGCCGACGC
GGCCTGTGGA TCGTCGAGGA TGACGTCTAC GGCGTGCTCG GCAGCGCCGC GCCACTGGCG
GTGCAGGTGC CAGAACGCTG CCTGCTGATC AGCAGTTTGT CCAAAAGCGT CGCGCCCGGA
CTGCGCCTGG GTTTTATCGC CGGCGCACCC GAGCTGCTCG AGCGTATCGA CCCCGAGGCC
CAGGCCACCC GCTGGGCCGT GACGCCGCTG AGCCTGGCGC TGGCCTGCGA ATGGGTCGAA
AGCGGCGTCG CCGAACGGCG CCTGGCCTGG CAGATCGAGG AATTGCAGCA GCGCTGGCGC
CTGGCCGCGC GGGTGCTCGG GCCGCGCATG CCGCAGGGCA GGGCGGTGGC GCCGCATCTG
TGGCTCGATG GCGCGCCGCC GACCGGTTTG GCCGAGGCCT GTCGGCAGCA TGGCGTCGAG
GTGGTGCCGG CCGAGGTGTT CGCAGTGGAG GCCAACCCCG GTCATGCGGT GCGTGTCAGC
CTCGCCGCGG CAGCCAGCCG GGTCGAACTC AAACGCGCAT TGGAAGGGAT AGTCGCAGCC
TGGCCCGTTT AG
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| Protein sequence | MLVRRIVWVN LYIAWQTMWL PDLQDSALPT YLALVEAIAT AIGRGELKPG ERLPPQRRLA
WTLGINPSTV MLAYREAARR HLVSGEVGRG TYVLAGSREA SLFRLKQPAA QGELIDLSTN
VPVHDPDNRD LSASLAALAA RGELDALQAY PSAALVERAH LAGATWLRRR GLELAPNGLL
LCAGAQQGVS AALLALCEAG EPILVERYTA PGIKAAARQL RLPLHGVAMD ERGILPDDLD
RQARATGARV AVLTPCLQNP TGASLDTERR AAIAEVARRR GLWIVEDDVY GVLGSAAPLA
VQVPERCLLI SSLSKSVAPG LRLGFIAGAP ELLERIDPEA QATRWAVTPL SLALACEWVE
SGVAERRLAW QIEELQQRWR LAARVLGPRM PQGRAVAPHL WLDGAPPTGL AEACRQHGVE
VVPAEVFAVE ANPGHAVRVS LAAAASRVEL KRALEGIVAA WPV
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