Gene Pmen_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3746 
Symbol 
ID5105741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4129205 
End bp4130236 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID640505001 
Productalcohol dehydrogenase 
Protein accessionYP_001189226 
Protein GI146308761 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA GCGCCGAACT CGCCACTTTC AGCGGCTGGG CCGCCACCGC CCCCAAGGCG 
CCGCTGGAGC GCCACAGCTA CGACCCCGGC CCGCTGGGTG CCGAGGAAGT CGAGATCGCG
GTGGAATACT GCGGCATCTG CCACTCCGAC CAGTCGATGA TCGACAACGA GTGGGGCAAC
GCGCGCTACC CCTTTATCCC CGGCCATGAA GTGGTGGGCA CCGTCGTCCG CCTCGGCGAG
CAGGCACGCG GCCTCGCGCT GGGCCAGCGC GTCGGCATCG GCTGGTACAA GGGCAGCTGC
ATGCATTGCG GCTCGTGCAT GGAGGGCTCG CACCAGCTGT GCCGCTCGGT GAAGCCGACC
ATCGTCGGCA GCCACGGCGG TTTCGCCGAC CGCCTGCGCT CGCACTGGGC CTGGGCCGTG
CCGCTGCCCG ACGGGCTCGA CCCGGCATTG GTCGGCCCGC TGTTCTGCGC CGGCTCCACG
GTGTTCAGCC CGCTGCTGGA ATTCGACATC AAGCCCACCG ACCGCGTCGG CGTGGTCGGC
ATCGGCGGCC TCGGCCACCT GGCGCTGCGT TTTCTCAACG CCTGGGGCTG CGAGGTGACC
GCCTTCACCT CCTCGCTGAA CAAACAGGAC GAAGCCAAGC GCCTGGGCGC GCACAAGGTG
GTGGCCTCCA CCGACAGCGC AGCGATGAAG GCGATTGCCG GCACGCTGGA TTTCCTCCTG
GTCACCGCCA GCGCCGATCT GGACTGGCAG GCGTTGATCG CCACCCTGCG TGGCAAGGGT
CGCCTGCACT TCGTCGGCAT CGTGCCCAGC GCCATTCCGG TGCACGTGTT CAACCTGATC
CCGCAGCAGA AGAGCCTGTC CGGCTCGCCG GTGGGCTCGC CGAGCACCAT GGCGACCATG
CTGGAGTTCT GCGCGCGCCA TCAGATCCTG CCGCAGGTCG AGCAGTTCCC CATGAGCCAG
GTGAACGCGG CCATCGACCA CCTGCGCAGC GGCAAGGCGC GCTACCGCGT GGTGCTGGAC
GCCAGCAAAT GA
 
Protein sequence
MSSSAELATF SGWAATAPKA PLERHSYDPG PLGAEEVEIA VEYCGICHSD QSMIDNEWGN 
ARYPFIPGHE VVGTVVRLGE QARGLALGQR VGIGWYKGSC MHCGSCMEGS HQLCRSVKPT
IVGSHGGFAD RLRSHWAWAV PLPDGLDPAL VGPLFCAGST VFSPLLEFDI KPTDRVGVVG
IGGLGHLALR FLNAWGCEVT AFTSSLNKQD EAKRLGAHKV VASTDSAAMK AIAGTLDFLL
VTASADLDWQ ALIATLRGKG RLHFVGIVPS AIPVHVFNLI PQQKSLSGSP VGSPSTMATM
LEFCARHQIL PQVEQFPMSQ VNAAIDHLRS GKARYRVVLD ASK