Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3746 |
Symbol | |
ID | 5105741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4129205 |
End bp | 4130236 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505001 |
Product | alcohol dehydrogenase |
Protein accession | YP_001189226 |
Protein GI | 146308761 |
COG category | [R] General function prediction only |
COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCA GCGCCGAACT CGCCACTTTC AGCGGCTGGG CCGCCACCGC CCCCAAGGCG CCGCTGGAGC GCCACAGCTA CGACCCCGGC CCGCTGGGTG CCGAGGAAGT CGAGATCGCG GTGGAATACT GCGGCATCTG CCACTCCGAC CAGTCGATGA TCGACAACGA GTGGGGCAAC GCGCGCTACC CCTTTATCCC CGGCCATGAA GTGGTGGGCA CCGTCGTCCG CCTCGGCGAG CAGGCACGCG GCCTCGCGCT GGGCCAGCGC GTCGGCATCG GCTGGTACAA GGGCAGCTGC ATGCATTGCG GCTCGTGCAT GGAGGGCTCG CACCAGCTGT GCCGCTCGGT GAAGCCGACC ATCGTCGGCA GCCACGGCGG TTTCGCCGAC CGCCTGCGCT CGCACTGGGC CTGGGCCGTG CCGCTGCCCG ACGGGCTCGA CCCGGCATTG GTCGGCCCGC TGTTCTGCGC CGGCTCCACG GTGTTCAGCC CGCTGCTGGA ATTCGACATC AAGCCCACCG ACCGCGTCGG CGTGGTCGGC ATCGGCGGCC TCGGCCACCT GGCGCTGCGT TTTCTCAACG CCTGGGGCTG CGAGGTGACC GCCTTCACCT CCTCGCTGAA CAAACAGGAC GAAGCCAAGC GCCTGGGCGC GCACAAGGTG GTGGCCTCCA CCGACAGCGC AGCGATGAAG GCGATTGCCG GCACGCTGGA TTTCCTCCTG GTCACCGCCA GCGCCGATCT GGACTGGCAG GCGTTGATCG CCACCCTGCG TGGCAAGGGT CGCCTGCACT TCGTCGGCAT CGTGCCCAGC GCCATTCCGG TGCACGTGTT CAACCTGATC CCGCAGCAGA AGAGCCTGTC CGGCTCGCCG GTGGGCTCGC CGAGCACCAT GGCGACCATG CTGGAGTTCT GCGCGCGCCA TCAGATCCTG CCGCAGGTCG AGCAGTTCCC CATGAGCCAG GTGAACGCGG CCATCGACCA CCTGCGCAGC GGCAAGGCGC GCTACCGCGT GGTGCTGGAC GCCAGCAAAT GA
|
Protein sequence | MSSSAELATF SGWAATAPKA PLERHSYDPG PLGAEEVEIA VEYCGICHSD QSMIDNEWGN ARYPFIPGHE VVGTVVRLGE QARGLALGQR VGIGWYKGSC MHCGSCMEGS HQLCRSVKPT IVGSHGGFAD RLRSHWAWAV PLPDGLDPAL VGPLFCAGST VFSPLLEFDI KPTDRVGVVG IGGLGHLALR FLNAWGCEVT AFTSSLNKQD EAKRLGAHKV VASTDSAAMK AIAGTLDFLL VTASADLDWQ ALIATLRGKG RLHFVGIVPS AIPVHVFNLI PQQKSLSGSP VGSPSTMATM LEFCARHQIL PQVEQFPMSQ VNAAIDHLRS GKARYRVVLD ASK
|
| |