| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3739 |
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| Symbol | |
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| ID | 5105734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4122654 |
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| End bp | 4125188 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640504994 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001189219 |
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| Protein GI | 146308754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC TGCCCATCGA TGCCCTGTTA CCTGCCCTGC GCGATGCCTT GAGCGCCCGC
CACGAAGTGG TGCTGGAGGC GCCGCCCGGC GCCGGCAAGA CCACTCGCGT GCCGCTGGCG
CTGCTCGATG CGCCCTGGCT GGCCGGACAG ACCATCCTCA TGCTCGAACC ACGCCGGCTG
GCCGCCCGCG CCGCCGCCGA GCGCCTGGCC AGCGAGCTGG GCGAACGGGT CGGCGAGACG
GTGGGCTACC GCATTCGCCT GGACAGCAAG GTGGGGCCGA ACACGCGCAT TGAGGTGGTC
ACCGAAGGCA TCCTCGCCCG CCGCCTGCAG GACGATCCGG CGCTGGAAGG CGTCGGCCTG
GTGGTCTTCG ACGAATTCCA CGAGCGCAGC CTGGATGCCG ATCTGGCCCT GGCGCTGACC
CTGAACGGGC GCGCCATGTT CCGCGGCGAA GGCAGCGGCG AGGCGCCGCT AAAGGTGCTG
CTGATGTCCG CCACCCTGGA AGGGGAGCGT CTGGCGGCGC TGCTTGGTGA GGCGCCGGTG
CTGCGCAGCG AAGGGCGCAT GTTTCCGGTG GATATTTGCT GGGGCGCGCC ATTTCAGCCA
GGCGAGTGGA TCGAGCCGCG GGTGCTGCAG ACGGTGCAGC AGGCCCTGGC CGACGAGCCC
GGCAGCCTGC TGGTGTTCCT GCCCGGGCAG GCCGAGATCC GCCGCGTCGC CGAGCAGCTG
GGCGAGGCGC TGGCGGGGCG CGACGACATT CTGCTCTGCC CGCTGCATGG CGAGCTCGAT
CTGGCCGCCC AGCGCGCCGC CATCGAGCCG GCGCCGGCGG GCACGCGCAA GGTGGTGCTG
GCCACCAATA TTGCCGAGAC CAGCCTGACC ATCGACGGCG TGCGCGTGGT GGTGGATGCC
GGCCTGGCGC GGGTGCCGCG CTTCGACCCA GCCAGTGGCA TGACCCGTCT CGATACCCAG
CGCATCTCCC GGGCTTCCGC GACCCAGCGT GCCGGCCGCG CCGGGCGTCT GCAGCCGGGT
GTGTGCTATC GGCTGTGGTC GCAGGCGCAG CACGAGCAGC TCAGCGCCTA TTCCGGTGCG
GAAATCCTTG CGGCCGATCT GGCCGGGTTG GCCCTGCAAC TGCTGCGCTG GGGCGTGACG
CCGCAGGAGC TGAGCTGGCT CGACGTGCCG CCGCCGGCTG CCTACGCGCA GGCGCTGGAT
CTGCTCGGCC GCCTCGGCGC GCTGGACGAA CGTGGCGCGC TCAATGCCCA TGGCCAGGCC
ATGGCCGAGC TGCCCAGCCA TCCACGCATC GCCCATCTGC TGCTGCGTGG CCAGGCGCTG
GGCCTGGGCG CGCTGGCCTG CGATCTGGCC GCGCTGCTCT CCGAGCGCGA CATTCTGCGC
GGCGGCGGCG CCGATCTGCA CAGTCGCCTG GCCCTGCTCA GCGGCGAAAG CCGCGCCACG
CGCAGCGCTC AAGGCGGCGT GCAGCGCGCC CGGCAGCTGG CCAAGCAGTT TCAGGGGCTG
CTCAAGGGGC GGCTGGTCAT TGGGGCGGTG AGCGACCCCG AGCACCCGCG CTGGCTCGGC
TGTCTGCTGG CCTTCGCCTA CCCCGACCGC ATCGCCCAGC AGCGCCGCGC CGGCGGCGCC
GACTACCGCC TGGCCAACGG CCGCGCCGCG CAGTTCGCTG AGGCCGATGC GCTGATGAAG
CACGAATGGC TGGTGGTGGC CGACCTGGGT AGCCGTCAGG GTCAGCGCGA GGAGCGCATC
TATCTCGCCG CCGATCTCGA CCCGGCGCTG TTCGAGCGCG AACTGGCCGA ACAGGTCACG
ACGCTGGAGG TGCTCGACTG GGACGAGCGC GAAGGCGTGC TGCGCGCCGA ACGTCAGCGC
AAGGTGGGCG AACTGGTGCT GGAGCGCCAG GCACTGGCGG CGCTGGACGA GGACACGCGC
AGCCGCGCCC TGGTCGGCCT GGTGCGACGC AAGGGCCTGG AGCTGCTGCC CTGGACGCCC
GAACTGCGTC AGTGGCAGGC ACGCGTGGCG CTGCTACGCG AGCTCGATTT GCAGCAGCAC
GGGCAGAGCG AATGGCCGGA CCTGTCCGAT GCCGCGCTAT TGGCCAGCCT CGAGCAGTGG
CTGGCGCCGT TTCTGGGCAA GGTCAATCGC CTCAGCCACT TCGCCAATCT CGACCTGCCG
GCGATCCTGC AGACGCTGCT GCCCTGGCCG CTGCCGCAAC GTCTCGACGA GCTGGCGCCG
CGCACGCTGA GCGTGCCGTC CGGCTCGCGC ATCGCCATCG ACTACACGGA AAACCCGCCG
GTGCTCGCCG TGCGCCTGCA GGAGCTGTTC GGTCTGGCCG CCACGCCGCG CATCGCCGGC
GGCCGCCTGG GCCTCAAGCT GCACCTGCTG TCGCCGGCGC GCCGGCCGGT GCAGGTCACC
CAGGATCTGG CCAGCTTCTG GGCCAACACC TACCTGGAGG TGAAGAAGGA CCTGAAGGGG
CGGTATCCCA AGCACTACTG GCCGGACGAC CCGCTGATCG CCGAACCCAC GGCGCGCGCC
AAACCCCGCA AATGA
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| Protein sequence | MNALPIDALL PALRDALSAR HEVVLEAPPG AGKTTRVPLA LLDAPWLAGQ TILMLEPRRL
AARAAAERLA SELGERVGET VGYRIRLDSK VGPNTRIEVV TEGILARRLQ DDPALEGVGL
VVFDEFHERS LDADLALALT LNGRAMFRGE GSGEAPLKVL LMSATLEGER LAALLGEAPV
LRSEGRMFPV DICWGAPFQP GEWIEPRVLQ TVQQALADEP GSLLVFLPGQ AEIRRVAEQL
GEALAGRDDI LLCPLHGELD LAAQRAAIEP APAGTRKVVL ATNIAETSLT IDGVRVVVDA
GLARVPRFDP ASGMTRLDTQ RISRASATQR AGRAGRLQPG VCYRLWSQAQ HEQLSAYSGA
EILAADLAGL ALQLLRWGVT PQELSWLDVP PPAAYAQALD LLGRLGALDE RGALNAHGQA
MAELPSHPRI AHLLLRGQAL GLGALACDLA ALLSERDILR GGGADLHSRL ALLSGESRAT
RSAQGGVQRA RQLAKQFQGL LKGRLVIGAV SDPEHPRWLG CLLAFAYPDR IAQQRRAGGA
DYRLANGRAA QFAEADALMK HEWLVVADLG SRQGQREERI YLAADLDPAL FERELAEQVT
TLEVLDWDER EGVLRAERQR KVGELVLERQ ALAALDEDTR SRALVGLVRR KGLELLPWTP
ELRQWQARVA LLRELDLQQH GQSEWPDLSD AALLASLEQW LAPFLGKVNR LSHFANLDLP
AILQTLLPWP LPQRLDELAP RTLSVPSGSR IAIDYTENPP VLAVRLQELF GLAATPRIAG
GRLGLKLHLL SPARRPVQVT QDLASFWANT YLEVKKDLKG RYPKHYWPDD PLIAEPTARA
KPRK
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