Gene Pmen_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3725 
Symbol 
ID5105720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4111679 
End bp4112680 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content68% 
IMG OID640504980 
ProductCheC, inhibitor of MCP methylation 
Protein accessionYP_001189205 
Protein GI146308740 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCGC TGCTGGTCTG TGACGACTCC AACATGGCGC GCAAGCAACT GATTCGCGCG 
CTGCCGCCGG AATGGCCGGT GACCCTGAGC CAGGCGGCCA ATGGCGAGGA GGCGCTGGCA
CTGGTGCGTC AGGGCCAGGG CCAGATCATG CTGCTGGACC TGACCATGCC GGTGCTCGAC
GGCTACCAGA CCCTGGCCGC GCTGCGGGCC GAGGGGCTAC AGAGCCAGGT CATCGTGGTG
TCCGGCGACG TGCAGGACGA AGCCGTGCGC CGCGTGCGCG AGCTGGGCGC CCTGGCCTTT
ATCAGGAAAC CCGCTGACCC CGCCATCCTG CGCCAGACGC TGATTGAGCT GGGCCTGTTC
AACCCCCAGG CCACGCCCAT GGCGCAGGCC CAGGCCGCGG CCCTGTCGGA GCTGAAGGTC
AGCTTCCGCG ACGCCCTGCG CGAGGTAAGC AACGTCGCCA TGGGCCGCGC CGCCGCGCTG
CTGGCCAAGG TGCTGGGGGT GTTCGTGCAG CTCCCCGTGC CGCAGGTGAA TCTCTTCGAG
GTCAGCGAGC TGCACATGAC CCTGCTCGAC GCCCAGCGCG GCGAGCGCTT CAGCGCCATC
TGCCAGGGCT TCATCGGCGA AGCCATCGCC GGCGAGGCGC TGCTGTTGTT CCATGACTCG
GAAGTGAACG ACATGGCGCG CCTGCTCGGC TGGCAGCCGA AGAACGAGAC GCAGACTTCG
GAGATGCTGC TGGACCTGGC CAGCATCCTG ATCGGCGCCT GCCTGGCCGG CGTCGCCGAG
CAGCTCGACC TGCGTTTCTC CCAGGGCCAC CCGCAACTGC TCGGCCAGCA TGCCAGCCTC
GACCAGTTGA TTCAGGTCAA CCGCCAGCGC TGGCGCAAGA CCCTGGCCGT GGAGATCAGC
TACAGCCTGG AGGGCCACGC CATTCATTTC GACCTGCTGC TGTTGTTCAC CGAAGACTCG
ATCGCCCGCC TGACGGCGAA GATCGGCTAC CTGATGGAGT GA
 
Protein sequence
MIPLLVCDDS NMARKQLIRA LPPEWPVTLS QAANGEEALA LVRQGQGQIM LLDLTMPVLD 
GYQTLAALRA EGLQSQVIVV SGDVQDEAVR RVRELGALAF IRKPADPAIL RQTLIELGLF
NPQATPMAQA QAAALSELKV SFRDALREVS NVAMGRAAAL LAKVLGVFVQ LPVPQVNLFE
VSELHMTLLD AQRGERFSAI CQGFIGEAIA GEALLLFHDS EVNDMARLLG WQPKNETQTS
EMLLDLASIL IGACLAGVAE QLDLRFSQGH PQLLGQHASL DQLIQVNRQR WRKTLAVEIS
YSLEGHAIHF DLLLLFTEDS IARLTAKIGY LME