| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3722 |
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| Symbol | |
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| ID | 5105717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4108088 |
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| End bp | 4109008 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504977 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001189202 |
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| Protein GI | 146308737 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTAC CGCTGGTCTA CCACGAGGAT TACAGCCCGC CCTTCCCGGC CGGGCATCGC
TTCCCCATGG AGAAATTCCG CCTGCTGCGC GATCACCTGG TCGATAGCGG CCTGACCAGC
GATGCCGAAC TGCAACGCCC GGAGCTGTGC CCGGCGGAGA TTCTCGCCCT GGTTCACTGC
CCGGACTACA TCGCACGCTA CATGGCCGGC GAGCTATCAT ACGAGGACCA GCGCCGCCTC
GGCCTGCCCT GGAGCGAGGC GCTGGCGCGG CGCACGGTGC GCGCCGTGGG CGGCTCGCTG
CTGACTGCCG AACTGGCCCT GCGCCACGGT CTGGCCTGCC ACCTGGCCGG CGGCACGCAC
CATGCGCACT ACGATTTTCC TTCCGGCTTC TGCATCTTCA ACGACCTGGC GGTGATCGCA
CGCTACCTGC TGGAAGCCGG CCGCGTGCAT CGCGTGCTGA TCTTCGACTG CGACGTGCAC
CAGGGCGACG GCACCGCGCG ACTGCTGGAA GACGAGCCGG ATGCGATCAC CGTGTCGCTG
CACTGCGAGC AGAACTTCCC GGCGCGCAAG GCCGAAAGCG ACTGGGACAT TCCCCTGCCA
CGCGGCATGG GCGACGCCGA TTACCTGAAG GTGGTGGATG ACACGCTGAA CTACCTGCTG
CCGATCTACC AGCCGGACCT AGTGCTCTAC GACGCCGGCG TCGACGTGCA CAAGGACGAC
GCCCTGGGCT ACCTGCAACT CACCGACGCC GGCCTGGCCG CCCGCGACGA AGCCGTGCTG
CATCACTGCC TGGGCCGCGA CATACCGGTG TTGGGGGTGA TCGGCGGCGG CTACTCGAAG
GATCACGCCG CCCTCGCCCG CCGCCACGGC ATCCTGCACC ACAGCGCCGC AAAGGTGTGG
GCGGCGCGAG GGCTGCGCTG A
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| Protein sequence | MPLPLVYHED YSPPFPAGHR FPMEKFRLLR DHLVDSGLTS DAELQRPELC PAEILALVHC
PDYIARYMAG ELSYEDQRRL GLPWSEALAR RTVRAVGGSL LTAELALRHG LACHLAGGTH
HAHYDFPSGF CIFNDLAVIA RYLLEAGRVH RVLIFDCDVH QGDGTARLLE DEPDAITVSL
HCEQNFPARK AESDWDIPLP RGMGDADYLK VVDDTLNYLL PIYQPDLVLY DAGVDVHKDD
ALGYLQLTDA GLAARDEAVL HHCLGRDIPV LGVIGGGYSK DHAALARRHG ILHHSAAKVW
AARGLR
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