| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3720 |
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| Symbol | |
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| ID | 5105715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4105850 |
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| End bp | 4107472 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504975 |
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| Product | hypothetical protein |
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| Protein accession | YP_001189200 |
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| Protein GI | 146308735 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03605] SagB-type dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGATG TGCTCGCCTA TCACCAGCTC AGCAAGCATG CGCCGGAACG CTTCGCGCCG
GGGCCGGGGC AACTGGACTG GGCAACCCAG CCGGCGCCGT TTCGCCGTTA TGCGGGGGCG
CGGCTGATCG AGCTGTACCA CCGCCCGCTG GAAGAAGGGC CGGGCTACGA CACGGCATTC
GCCGGGCCGC AGACGCCGCC TGCGCCGCTG AATCGCGCCA GCGTCTCGCA ATTGCTGTAC
GACAGCCTGG CCATTTCCGC CTGGAAGGAA GCCGGCGGCA ATCGCTGGGC GCTGCGGGTC
AACCCGTCAT CCGGCAACCT GCACCCGACC GAGGCCTATC TGCTGTTGCC ACCGGATGCC
GTGGATGAGC TCGCTGTGCT GGCCCACTAT GCCCCGGATG TCCATGCGCT GGAGGTACGC
AGCGAGCTGC CCGCGCCGCT TGGCCGGCAG CTGGCGAGCA GCCTGCCGCC CGGTGGTTTT
CTCCTGGGGC TGAGCAGCAT CGCCTGGCGC GAGGCCTGGA AGTACGGCGA GCGCGCCTAC
CGCTACTGCC AGCACGACCT GGGGCACGCC CTGGCGGCGT TGGCCATTGC CGCCAGCGTG
CAGGGCTGGC AGGTGCGCAT GCTGCATGGC GTGGCCGAAG CGCGTCTGGA CGGCCTGCTG
GGGCTGGACG ATGAGGGCTT TCACGAAGCC GAACACGGCG ACTGCCTGCT GTGGATCGGC
CCGGCGCAAG CGATGGAAAT CGCGCTGCCC GAAACCCTGC TTAACGGGTT GGCGCAGCTA
GAGCGGGTCG GAGCGCCCAA TCGTCTGTCG CGCGAGTATC GCCACTGGCC GGAGCTGCAG
CGGGTGCATG GGCTGTGCCG CGCGCCGGCA CGTCCTCGCG CCGTCTGGAA CCTGGATGCG
GCCGACGCAC GGGCCGACAA CCCCGGCCTG CCACTGCGGC CGATCCTGCA TCGCCGACGC
AGTGCGCAGG CCATGGATGG CCGCAGCGGC ATTCAGGCGT CACTGCTGCT GGCCTGGCTG
CGCCGGCTGA TGCCGCCGCA GTCGCAGGTG CCCTTCGCCG TGAGCGGTGA GCCGAGCGAG
ATCGACCTGC TGCTGTTCGT CCACCGCGTG CAGGGCTTGG CGCCGGGGCT GTACTGGCTG
GATCGCACAG GCAGCGGGGT GCAGCCACTG CGCGAGGATT ACCAATGGCT GCGGGTGGAT
GACGAGCTGC CGCTGTACCG TCTGCTCGAA GGTGACGCCC GTGGTCTGGC GGGCTTTCTC
AGTTGCGGCC AGGACATCGC CGCCGATGGC TGCGTGGCCT TGGCCATGCT GGCGCGGGTG
GAGCGCGCCC TGGCCAATGG CGCCTGGCGC TATCCCAGGC TCTACTGGGA ATGTGGCCAG
ATCGGTCAGT TGCTCTATCT GGAAGCCGAA GCGGCAGGGC TTTCCGGTAC GGGCATCGGT
TGCTACTTCG ACGACGCCTT GCGCGAGTTG CTCGGCGATG CCGACAGCGG GCTGCAAAGT
CTTTACCATT TCACCCTTGG CCGCGCCGTT TGGGATGAAC GCCTGACATC GCTGCCGGCC
TACCCGCAAC TGCGTATACC CCCGTGCAAG GAGACGATAC CCCATGACTC AGGTTCTCGA
TGA
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| Protein sequence | MKDVLAYHQL SKHAPERFAP GPGQLDWATQ PAPFRRYAGA RLIELYHRPL EEGPGYDTAF
AGPQTPPAPL NRASVSQLLY DSLAISAWKE AGGNRWALRV NPSSGNLHPT EAYLLLPPDA
VDELAVLAHY APDVHALEVR SELPAPLGRQ LASSLPPGGF LLGLSSIAWR EAWKYGERAY
RYCQHDLGHA LAALAIAASV QGWQVRMLHG VAEARLDGLL GLDDEGFHEA EHGDCLLWIG
PAQAMEIALP ETLLNGLAQL ERVGAPNRLS REYRHWPELQ RVHGLCRAPA RPRAVWNLDA
ADARADNPGL PLRPILHRRR SAQAMDGRSG IQASLLLAWL RRLMPPQSQV PFAVSGEPSE
IDLLLFVHRV QGLAPGLYWL DRTGSGVQPL REDYQWLRVD DELPLYRLLE GDARGLAGFL
SCGQDIAADG CVALAMLARV ERALANGAWR YPRLYWECGQ IGQLLYLEAE AAGLSGTGIG
CYFDDALREL LGDADSGLQS LYHFTLGRAV WDERLTSLPA YPQLRIPPCK ETIPHDSGSR
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