| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3715 |
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| Symbol | |
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| ID | 5105710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4098402 |
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| End bp | 4099550 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504970 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001189195 |
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| Protein GI | 146308730 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.970475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACGA AGCCAGCCGT AGCCGCCTTG GTTTCCGCCA TCGCCGTGGC TCTGCTCAGC
CTTGGCGGCT GCAAGGAAGC CAGCGCCCCA CAGGCCCAGC AAGCCCCCGA AGTCGGAGTG
GTGACGCTAC AGGCGCAGCC CTTTGCCCTC ACCACCGAGG TGCCCGGCCG TACCAGCGCC
TACCGCATCG CCGAGGTGCG CCCGCAGGTC AATGGCATCA TCCAGAAGCG CCTGTTCACC
GAAGGCAGCG AAGTCAAGGC CGGTCAGCAG CTGTACCAGA TCGACCCGGC CACCTATGAA
GCCGCGTTCA AGAGCGCCCA GGCCACGCAG CTGTCGGCCA AGTCCCTGGC CGACCGCTAC
AAGCTGCTGG TGGCCGACAA GGCGGTCAGC CAACAGGCTT ACGACGAGGC GCGCGCCGCC
GGCCTGCAGG CCGACGCCGC GCTGGAGCAG GCGCGCATCG ACCTGCGCTA CACCAAGGTG
ATGGCGCCCA TCAGCGGTCG CATCGGCCGC TCCGCGGTGA CCGAAGGGGC GCTGGTCAGC
AACGGCCAAG CCAACGCCAT GGCCACCATC CAGCAAATCG ACCCGATCTA CGTCGACGTC
ACCCAGTCGA GCAAGGATCT GCTGCGCCTG CGCCGCGATC TGGCCGATGG GCGTCTGCAG
AAGGCCAGCG ACAGCGCCGC CAAGGTCGCG CTGAAGCTGG AGGACGGCAG CCGCTACGCC
CATGAAGGCA CCCTGGAATT CTCCGAGGTG GCGGTGGACG AAAGCACCGG TTCGGTGACC
CTGCGCGCCG TGTTCCCCAA CCCCGACCAC CTGCTGCTGC CAGGCATGTT CGTGCATGCC
GAGCTGCTCT CCGGGGTCAA GGAGAACGCC ATCCTCGCCC CGCAGCAGGG CGTGACCCGC
AACCAGCGCG GCGAACCGAC GGCGATGGTG GTGGGCGCCG ACAACAAGGT CGAACTGCGC
GTGCTCAAGG CCGACCGCAC CGCCGGCAAC ACCTGGCTGG TGGAGGACGG CCTGCAGGAA
GGCGATCGCC TGATCACCGA AGGCCTGCAG TTCGTCCAGC CCGGCGCCGA GGTCAAGGCC
GTGCCGGCGC GCAACGTGAA AGCCGGCGAG GTGGCGCAGG ACGCCGCCAA GAACAACGGC
AAGGGATAA
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| Protein sequence | MHTKPAVAAL VSAIAVALLS LGGCKEASAP QAQQAPEVGV VTLQAQPFAL TTEVPGRTSA
YRIAEVRPQV NGIIQKRLFT EGSEVKAGQQ LYQIDPATYE AAFKSAQATQ LSAKSLADRY
KLLVADKAVS QQAYDEARAA GLQADAALEQ ARIDLRYTKV MAPISGRIGR SAVTEGALVS
NGQANAMATI QQIDPIYVDV TQSSKDLLRL RRDLADGRLQ KASDSAAKVA LKLEDGSRYA
HEGTLEFSEV AVDESTGSVT LRAVFPNPDH LLLPGMFVHA ELLSGVKENA ILAPQQGVTR
NQRGEPTAMV VGADNKVELR VLKADRTAGN TWLVEDGLQE GDRLITEGLQ FVQPGAEVKA
VPARNVKAGE VAQDAAKNNG KG
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