| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3714 |
|---|
| Symbol | |
|---|
| ID | 5105709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4097583 |
|---|
| End bp | 4098221 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640504969 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001189194 |
|---|
| Protein GI | 146308729 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGAC GAACCAAAGA AGAGGCACAG GCGACGCGGG CGCAGATACT CGATGCCGCG
GAGCAGGTGT TCCACGCCCA GGGCGTATCC CGGGCGTCAC TGGCGGAGGT GGCCAAGGCG
GCGAGCGTCA CCCGCGGCGC CATCTACTGG CACTTCGAGA ACAAGATCGA TCTGTTCCAG
GCCATGCTCG AGCGTCTGCG TCTGCCGCTG GAGGAACTGG CGCGGGCCAG CGAGAGCGAG
GACGAACCCG ACCCGCTGGG CTGCATGCGC GAACTGCTGA TCAAGGCTCT GACACGCCTG
GCGAGCGAGC CGCAGACCCG GCGTACCCAT GACATCCTGC GTTACAAATG CGAGTACACC
GGCGAGCTGC TCGGCCTGCG CGAGCGCATG CAGGCGCTCA GTGCCGAGTG CGATCAGCGC
ATCGCCAAGG CGTTGAGCAA CGCCGTCGGC AAGGGCCAGC TACCGGCTGA GCTGGACTGC
CGGCGCGCGG CCGTCTGCCT GCATGCCTAC ATGGAAGGCA TCGAGGCCAA CTGGCTGCTG
GTACCCAGCT TCGACCTGGC TGCCCAGGCC CCGGCGCTGG TCGATACCGT GCTGGACATG
CTGCGCAGCC CCGCGCTGCG TCGGGTGCCG ACTGGTTAA
|
|---|
| Protein sequence | MVRRTKEEAQ ATRAQILDAA EQVFHAQGVS RASLAEVAKA ASVTRGAIYW HFENKIDLFQ
AMLERLRLPL EELARASESE DEPDPLGCMR ELLIKALTRL ASEPQTRRTH DILRYKCEYT
GELLGLRERM QALSAECDQR IAKALSNAVG KGQLPAELDC RRAAVCLHAY MEGIEANWLL
VPSFDLAAQA PALVDTVLDM LRSPALRRVP TG
|
|---|
| |