Gene Pmen_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3706 
Symbol 
ID5105701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4089164 
End bp4090111 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID640504961 
Productadenosine deaminase 
Protein accessionYP_001189186 
Protein GI146308721 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACT GGCTCAATGC CCTGCCCAAG GCCGAACTGC ACCTGCACCT CGAAGGCTCG 
CTGGAGCCCG AGCTGCTGTT CGCCCTGGCC GAGCGCAACA AGATCGAACT GCCCTGGGCC
GACGTGGAAA CCCTGCGCGC GGCCTATGCC TTCAACAACC TGCAGGAGTT TCTCGACCTG
TACTACCAGG GCGCCAACGT GCTGCGCAGC GAGCAGGACT TCTACGACCT GACCTGGGCC
TACCTGCAGC GCTGCAAGGC GCAGAACGTC GTCCACGTCG AGCCCTTCTT CGACCCGCAG
ACCCACACCG ACCGCGGCAT CCCCTTCGAG GTGGTGCTGC GCGGCATCCG CCAGGCCCTG
CTCGACGGCG AAAAGCAGCT GGGCATCAGC CATGGCCTGA TCCTCAGCTT CCTGCGTCAT
CTGCCCGAGG AAGAGGCGTT CAAAACCCTG GAGCAGGCCA TGCCGTTTCG CGACGCATTC
ATCGGCGTCG GCCTGGACAG CTCGGAGAAG GGCTTCCCGC CGCGCCTGTT CGAGCGGGTG
TTCGCCAAGG CGCGTAGCGA AGGCCTGCAC GCGGTGGCGC ATGCCGGCGA GGAAGGCCCG
CCCGAATACA TCTGGGAAGC GCTGGACCTG CTCAAGGTCG AGCGCATCGA CCACGGCGTG
CGCGCCATCG AAGACGAGCG GCTGATGCAG CGCATCATCG ACGAGCAGAT CCCGCTGACC
GTCTGCCCGC TGTCGAACAT CAAGCTGTGC GTGTTCGAGC ACATGGGCCA GCACAACATC
CTCGACATGC TCGAGCGTGG CGTGAAGGTG ACGGTGAACT CGGACGACCC GGCCTACTTC
GGCGGCTACG TCGGCGAGAA CTTCGCCGCC CTGCACGAGC ACCTGGGCAT GAGCGAGGAG
CAGGCCAGAC GCCTGGCGCA GAACAGCCTG GACGCCAGGC TGGCCTGA
 
Protein sequence
MYDWLNALPK AELHLHLEGS LEPELLFALA ERNKIELPWA DVETLRAAYA FNNLQEFLDL 
YYQGANVLRS EQDFYDLTWA YLQRCKAQNV VHVEPFFDPQ THTDRGIPFE VVLRGIRQAL
LDGEKQLGIS HGLILSFLRH LPEEEAFKTL EQAMPFRDAF IGVGLDSSEK GFPPRLFERV
FAKARSEGLH AVAHAGEEGP PEYIWEALDL LKVERIDHGV RAIEDERLMQ RIIDEQIPLT
VCPLSNIKLC VFEHMGQHNI LDMLERGVKV TVNSDDPAYF GGYVGENFAA LHEHLGMSEE
QARRLAQNSL DARLA