| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3705 |
|---|
| Symbol | |
|---|
| ID | 5105700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4087704 |
|---|
| End bp | 4089059 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640504960 |
|---|
| Product | hydroxydechloroatrazine ethylaminohydrolase |
|---|
| Protein accession | YP_001189185 |
|---|
| Protein GI | 146308720 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCTA CCCGTATCTG GATCAAGAAC CCCCTCGCCG TTTTCACCGC CAACGCTCAG
GACGCTTCCG GCGGTCTGGT GGTCGAGGAC GGCCGCATCG TCGAGCTGCT CGGCGCCGGC
CAGCAACCGA CCGCCCCCTG CCAGCAGGCC TTCGATGCCC GCGAGCACGT GCTGCTGCCG
GGGCTGATCA ACACCCACCA CCACTTCTAC CAGACCCTCA CCCGCGCCTG GGCGCCGGTG
GTCAACCAGC CGCTGTTCCC CTGGCTGAAG ACCCTGTACC CGGTGTGGGC GCGGCTGACG
CCCGAGAAGC TGGCGCTGGC CAGCAAGGTG GCGCTGGCCG AGCTGCTGCT GTCGGGCTGC
AGCACCGCCG CCGATCATCA CTACCTGTTC CCCGGCGGCC TGGAACAGGC CATCGACGTG
CAGGTGGAGG TCGTGCGCGA ACTGGGCATG CGCGCCATGC TCACCCGCGG CTCGATGAGC
CTGGGCGAGG CCGACGGCGG CCTGCCCCCG CAGCACACGG TGCAGAGCGG CGAGGCGATC
CTGGCCGACA GCCAGCGCCT GGTCGAGCGC TACCATCAGC GCGGCGACGG CGCGCAGATC
CAGATCGCCC TGGCGCCCTG CTCGCCCTTC TCGGTGACCC AGGACATCAT GCGCGCCAGT
GCCGAACTGG CCGAGCAGCT GGACGTGCGC CTGCACACGC ACCTGGCCGA GACCCTCGAC
GAGGAAGACT TCTGCCTGCG TCAGTTCGGC CTGCGCACCG TGGACTATCT CGACAGCGTC
GGCTGGCTCG GCCCGCGCAC CTGGCTGGCC CACGGCATCC ACTTCAACGC CGAGGAGATC
GCCCGGCTCG GCGCCGCCGG CACCGGCATC TGTCATTGCC CCAGCTCGAA CATGCGCCTG
GCCTCGGGCA TCTGCCCCAG CGTCGAGCTG GAGGCGGCCG GCGCGCCGCT GGGCCTGGGT
GTGGACGGCT CGGCCTCCAA CGACGCCTCG AACCTGCTGC TCGAGGCGCG CCAGGCCCTG
TACATCCAGC GCCTGCGCTA TGGCGCCGAG CAGATCACCC CCGAGCGCGT CCTGGGCTGG
GCCACCCGCG GTTCGGCGCG CCTGCTCGGG CGCGACGATA TCGGCGAACT GGCGGTGGGC
AAGCAGGCGG ATCTGGCCCT GTTCAAACTG GACGAGCTGC GCTTCTCCGG CAGCCACGAT
CCGCTTTCGG CGCTGCTGCT GTGCGGCGCC GACCGCGCCG ACCGCATGAT GATCGCCGGC
CAATGGCGGG TGATCGACGG CCAGATCGAA GGGCTGGACG TCGCCCAGCT GATCGCCGAT
CACCGCCAGG CGGCGCGGGA ACTGGTAAAC GGCTGA
|
|---|
| Protein sequence | MAATRIWIKN PLAVFTANAQ DASGGLVVED GRIVELLGAG QQPTAPCQQA FDAREHVLLP
GLINTHHHFY QTLTRAWAPV VNQPLFPWLK TLYPVWARLT PEKLALASKV ALAELLLSGC
STAADHHYLF PGGLEQAIDV QVEVVRELGM RAMLTRGSMS LGEADGGLPP QHTVQSGEAI
LADSQRLVER YHQRGDGAQI QIALAPCSPF SVTQDIMRAS AELAEQLDVR LHTHLAETLD
EEDFCLRQFG LRTVDYLDSV GWLGPRTWLA HGIHFNAEEI ARLGAAGTGI CHCPSSNMRL
ASGICPSVEL EAAGAPLGLG VDGSASNDAS NLLLEARQAL YIQRLRYGAE QITPERVLGW
ATRGSARLLG RDDIGELAVG KQADLALFKL DELRFSGSHD PLSALLLCGA DRADRMMIAG
QWRVIDGQIE GLDVAQLIAD HRQAARELVN G
|
|---|
| |