Gene Pmen_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3700 
Symbol 
ID5105695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4084664 
End bp4085248 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content71% 
IMG OID640504955 
Producthypothetical protein 
Protein accessionYP_001189180 
Protein GI146308715 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTT CCCTGGCCGC ACCCTGCGAG TACCGCGAGG AAATCCGCAA GAGCCGCTTC 
CTCGCCGTCG CCGCGCCCAT CGCCAGCGCC GCCGAGGCGC AGGCCTTCAT CGAACGCCAC
GGCGACCCGA GCGCCTCGCA CAACTGCTGG GCGTGGAAGG TGGGCAACCA GTACCGCTTC
AACGATGACG GCGAACCCGG CGGCACGGCC GGCCGGCCGA TCCTCGCCGC CATCGAGGGG
CAGGATTGCG ACCAGGTGGT GGTGCTGGTG ATCCGCTGGT ACGGCGGCAT CCAGCTCGGC
ACCGGCGGCC TGGCCCGCGC CTATGGCGGC AGCGCGGCCA AGTGTCTGCA GGCGGGGGAG
CGGCGCGAGC TGGTGCTGCG CCAGGCGTTC GGCTGCCACC TGCAGTTCGC CGAGCTGGCG
CTGTTCAAGG CACGCCTGAA CGAGTTCGAC AGCCTGATCG AACGCGAGGA CTACGACGCC
ACCGGCGCGC GTCTGCAACT GGCCGTCGCG CCTGCCGAGC GCGAGGCGCT GGAGCGACTG
CTGGGCGACG TCAGCCGTGG CCGCGAGCGG TTGCACAGCC CATGA
 
Protein sequence
MAFSLAAPCE YREEIRKSRF LAVAAPIASA AEAQAFIERH GDPSASHNCW AWKVGNQYRF 
NDDGEPGGTA GRPILAAIEG QDCDQVVVLV IRWYGGIQLG TGGLARAYGG SAAKCLQAGE
RRELVLRQAF GCHLQFAELA LFKARLNEFD SLIEREDYDA TGARLQLAVA PAEREALERL
LGDVSRGRER LHSP